Gene Ksed_16000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_16000 
Symbol 
ID8373106 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1646821 
End bp1647321 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content70% 
IMG OID644991868 
ProductProtein of unknown function (DUF456) 
Protein accessionYP_003149380 
Protein GI256825420 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value0.148783 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0914905 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACTGGA CGGTCGTCAC CGGCGTCGTG GTCGCGGCCC TCATGGTCCT CGGACTGGTC 
GGCAGCACCC TGTTGGTGCT GCCGGGGCTG GCACTGATCT GGGGGTCCAC CCTGCTGTGG
GCGGTCGTCG CGCAGACGAC GGCCGCCTGG TGGGCCTTCG GGCTGGCCAC GGCCATCGCC
GCCATCGCAG CGGTGGCCGT CTGGTTGGTG CCGGGGCGTC GCATGAAGCG CGCCGGCATC
AGCAACACCA CCTTGCTGGC GGGCGTGGTG CTCGGCATCA TCGGATTCTT CGTCATCCCC
GTGGTCGGCC TGTTCCTCGG GTTCGTGGCC GGGGTCTTCC TCAGTGAATC CGCGCGTCGC
CGCACCAGCG CCCTCACCCC CTGGCAGGCC ACCGTCCAGG CCCTCAAGGC GGTGGGCACC
AACATCCTCA TCGAGATCCT GGCCGGCCTG CTCATCATCG GGGTGTGGAT CGCCAGCCTC
CTCCTGCCCG CCCTCTTCTG A
 
Protein sequence
MDWTVVTGVV VAALMVLGLV GSTLLVLPGL ALIWGSTLLW AVVAQTTAAW WAFGLATAIA 
AIAAVAVWLV PGRRMKRAGI SNTTLLAGVV LGIIGFFVIP VVGLFLGFVA GVFLSESARR
RTSALTPWQA TVQALKAVGT NILIEILAGL LIIGVWIASL LLPALF