Gene Ksed_15880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_15880 
Symbol 
ID8373094 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1629679 
End bp1632174 
Gene Length2496 bp 
Protein Length831 aa 
Translation table11 
GC content73% 
IMG OID644991856 
Productacyl-CoA synthetase (NDP forming) 
Protein accessionYP_003149368 
Protein GI256825408 
COG category[C] Energy production and conversion 
COG ID[COG1042] Acyl-CoA synthetase (NDP forming) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.00274098 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.158003 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGATG CCGCGCCCAC CACCGAGGAG CTCCGGGCGG CGCGGGCCGC CACCTGGGAG 
GCCGACGTCG TCCTGCGGGA CGGCGCCGTC GCGCACGTGC GCCCGATCCG GCCCGACGAC
CGCCGGGCCC TGGCCGCCTT CCACCGCGGC CAGTCCGAGC GCTCGCGCTA CCTGCGCTTC
TTCGCCGCGA TCCCGGAGCT CTCCGACCGG GACCTCGACC GCTTCACCCA GGTGGACCAC
GACCAACGGG TGGCCCTCGT GGCCGAGATC GGGGGCGAGA TCATCGCCAT CGCCCGGTTC
GACCGCATCG ACCCCACCAC CGCCGAGGTG GCCTTCAACG TCGCCGACGA GCACCAGGGC
CGGGGTCTGG GCTCGGTCAT GCTCGAGCAC CTCGCCGCCA TCGGGGACGA GGTGGGCCTG
GGCCGGTTCA CGGCCGACGT GCTGCCGGAG AACCGGCAGA TGATGAACGT GTTCACCGAG
GCGGGCTACG AGGTGGCCCA CCGCTTCGAG GACGGGGTCA TCGCCGTCTC CTTCGACATC
GAGCCCAACG AGCACTCGCG CGAGGTGCGG GAGTCGCGGG AGCAGCGCGC CGAGGCGCGG
TCGATGGTGC GCGTGCTGCG GCCGGAGTCG GTCGTCATGA TCGGTGTCTC GCGCCGTGAG
GAGGCGATCG GGCACAAGGT GCTGGCCGAG ATCGTGGCCG GCGGGTACCA GGGCCGGTTG
GAGGTGGTGC ACCCCGAGGT CGGCGAGCTC GCCGGCATCA CCACCACCCC CAGCGTGCGG
GAGGTGACCG GGCCGATCGA CCTGGCGATC ATCGCCCTGC CGGCCGACAC CGTGCACGAG
GTGGTGGCCG ACTGCGCCGC CATCGGGGTG CGCTCGGTGC TGGTGGTCTC CGCCGGGTTC
GCCGAGGCCG GGCCGGAGGG CGCCCGCCGC CAGCGCGAGC TGCTGCGGCT GGTGCACTAC
CACGGCATGC GCCTGGTGGG GCCGAACTCC TACGGGTTGA GCAACTCCTC CCCGGAGGTC
TCGCTGAACG CCACCCTCGG GGCGCCCTCG GTGCGGGGCC GGTTCGGGCT CTTCGCACAG
TCCGGGGCGC TCGGGGTGTC CGTCACCCAG ATGGCGCGCC AGCGCGGCGT GGGCCTGTCC
ACCTTCGTCT CGGCGGGCAA CCGGGCGGAC GTCTCGGGCA ACGACGTCAT GCAGTACTGG
ATGGAGGACG ACGACACAGC CGCCGTGGGG CTGTACCTGG AGACGCTGGG CAACGCGCGC
AAGTTCTTCC GCATCAGTCA GCGGCTCTCG GCCAAGAAGC CGATCATCGC CATCAAGTCC
GGCACCTCGG GCTACGGCGT GCCCCCGGGG CACCTCATCC GGCGCAGCCG CGCGCGACCG
GAGGCACTGG ACGCCATGCT GCGCCAGAGC GGCATCATCC GCGTGTCCAA CCTGCACCAG
ATGTTCAACA TCGCCCAGCT GGTGCTCCAC CAGCCCCTGC CCGCCGGGCG CGGGGTCGCC
GTGGTGGGCA ACTCCACGTC GCTGGCGGCG CTCGCGGCGG ACGCGTGCAT GGGGTGGGGG
CTGCAGGTGG CGCGCGAGCC GCACTCGTTG CCCCACGACG CCTCGATGGG GGAGATCGCC
GAGGCGCTCC ACGAGGCCTT CGAGGACCCC ACCGTGCACG CGGTGCTCGC GGTCTTCATC
CCGCCGCTGG TGGGCGACGG GCGCGACGTG GCACGCACGG TGGCCCAGGT GGCGCTGGAC
CACGAGAAGC CCTGCCTGAC CACCATGACC GGCATGGACG GGGTGAACGA GACGCTCTCG
GCCACGAAGG ACACGCCCGA CGGTCCGGTC ACCGAGGTGG TGCCGGCCTA CATGGTCCCC
GAGGACGCGG TGCGCGCCCT GAACGCCGTG GAGCGCTACG CGGCCTGGCG GCGCAGCTCC
CGCGGCGAGC TCGTGGCCCC CGAGGGCATC GACTGGCAGG CCATCGACGC CGCCCAGGAG
ATCGCCAGCG ACGCGCTGCT CTCGGCCCCG GTGGGTCGGG AGCTGCGCCC GGAAGAGACG
TCCGAGCTGC TGGCCGCCGT GGGTATCGAG CTGGCCACCG GCTCCGGTGG CGAGCCCGCC
GGTGGGTGGC CCACCGACGC GGTGCCGCTG GTGGTGGGCG CGACGGAGGA CCCGCTGTTC
GGCCCGGTGG TCTCACTGCG CTTCCACGGC TCGACAGCGG CCCTCCTGGG CACCCCCTCC
TACCGCGTGC CGCCGCTGAC CGACGCGGAC GTACACGACC TGGTGGATTC GCTCCAGGGC
AGTCGCCTGC TGGCCGAGCG CGGTGTGGAC CGGGCTGCCC TGGAGGAGCT AGTCGCTCGG
GTGTCGGTGC TGGCCGATGC GGTGCCCGAG CTCGCGGAGC TGCAGCTGAG CCCCGTCGAG
GTCACCCCCC GCGGCGTGGT GGTGCACGCG GCGCGGGCGA CGGTGGAACG CCCCGAGGTG
CGGCAGGACG CGGGGCGGCG GAGCATCTCC CGGTGA
 
Protein sequence
MDDAAPTTEE LRAARAATWE ADVVLRDGAV AHVRPIRPDD RRALAAFHRG QSERSRYLRF 
FAAIPELSDR DLDRFTQVDH DQRVALVAEI GGEIIAIARF DRIDPTTAEV AFNVADEHQG
RGLGSVMLEH LAAIGDEVGL GRFTADVLPE NRQMMNVFTE AGYEVAHRFE DGVIAVSFDI
EPNEHSREVR ESREQRAEAR SMVRVLRPES VVMIGVSRRE EAIGHKVLAE IVAGGYQGRL
EVVHPEVGEL AGITTTPSVR EVTGPIDLAI IALPADTVHE VVADCAAIGV RSVLVVSAGF
AEAGPEGARR QRELLRLVHY HGMRLVGPNS YGLSNSSPEV SLNATLGAPS VRGRFGLFAQ
SGALGVSVTQ MARQRGVGLS TFVSAGNRAD VSGNDVMQYW MEDDDTAAVG LYLETLGNAR
KFFRISQRLS AKKPIIAIKS GTSGYGVPPG HLIRRSRARP EALDAMLRQS GIIRVSNLHQ
MFNIAQLVLH QPLPAGRGVA VVGNSTSLAA LAADACMGWG LQVAREPHSL PHDASMGEIA
EALHEAFEDP TVHAVLAVFI PPLVGDGRDV ARTVAQVALD HEKPCLTTMT GMDGVNETLS
ATKDTPDGPV TEVVPAYMVP EDAVRALNAV ERYAAWRRSS RGELVAPEGI DWQAIDAAQE
IASDALLSAP VGRELRPEET SELLAAVGIE LATGSGGEPA GGWPTDAVPL VVGATEDPLF
GPVVSLRFHG STAALLGTPS YRVPPLTDAD VHDLVDSLQG SRLLAERGVD RAALEELVAR
VSVLADAVPE LAELQLSPVE VTPRGVVVHA ARATVERPEV RQDAGRRSIS R