| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ksed_15740 |
|---|
| Symbol | |
|---|
| ID | 8373080 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Kytococcus sedentarius DSM 20547 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013169 |
|---|
| Strand | - |
|---|
| Start bp | 1613653 |
|---|
| End bp | 1615812 |
|---|
| Gene Length | 2160 bp |
|---|
| Protein Length | 719 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 644991842 |
|---|
| Product | predicted acyltransferase |
|---|
| Protein accession | YP_003149354 |
|---|
| Protein GI | 256825394 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1835] Predicted acyltransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 0.221169 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCCCGG AACACCGTGA GCCGGAACTC GGCCGCCCCG TGCCCTCGGG GCAGCCCGTC
GCCGGCTTCG GCTCAGGCCC GGCCGACTCC GGGCGCATCC AGGGCCTGGA CGGCCTGCGC
GCGCTGGCCG TCGGCCTGGT GGTGGTGTAC CACCTCCTGC CGGATCGGCT GCCGGGTGGC
TTCATCGGGG TCGACGTCTT CTTCGTCATC TCCGGCTTCC TCATCACCAC CCTGTTGCTG
CGCGAGGTGC GTCGCAACGG GTACATGAAC ATGCCGACCT TCTGGATGCG GCGCATCCGA
CGGCTGCTGC CGGCCCTGGT GCTGGTGCTG CTGGTGTGCA CGGCGCTGGT GTGGATCGTG
GACGTCACCC GCGGGGGAGA CCTGCGGGTC GGGTTGGGGC GCCAGGTCCT CGGGGGGCTG
ACGTTCACCA CCAACTGGGT GGAGATCGCG CACGGCACCT CCTACTTCGA CCAGAACCAG
CCCGTGCTCT ACAAGCCACT GTGGTCGCTG GCGGTGGAGG AGCAGTTCTA CCTGCTGTGG
CCGCCGGCTC TGGCCCTGAT GCTGGTGCTC TCCGCCCGCT GGCGGCCACG CCTGCTCATG
GTGCTGGGCC TCGGGATGGG CTCGGCGCTG TGGATGGCGG TGCTCTACTT CACGGCCGAG
GACGTGACCC GCCCGTACTA CGGCACCGAC TCCCACCTGT TCGGGTTGAT GGCCGGGGTG
CTGGTGTCCT TCTGGTGGAT GTCCCGCGGC AGCTGGCTGC GGAGCCGGGC GTGGTGGCGG
TGGCGGGGGC CGGCGGGTCT CGCGGCCCTC GCGGGCGTGC TGCTGCTCTC GCGGGTGATG
CCGGAGGACC GTGCAGTCAC CTACCTCGGG GGACTGGTCC TGGCCTCGGT GCTGACCGCG
GTGGTCATCG CCTCGTTGCT GCCCGGGCGC ACCTGGTTGC ACACGCTGTT GGAGCTGCGG
CCCATGGAGT GGGTGGGGGA GCGCTCCTAT GGGCTCTACC TGTGGCACTG GCCGGTTCTG
CTGCTGATGC TGGCGGCCCT GCCGGCGCAG GAGGCCGGGT CCCTGGGGTA CTGGATGCTC
CGGCTGGTGG CGGTCGTGCT GACGGTGGCC GTCGCCGAGC TGAGCTACCG CTGGGTGGAG
ACGCCCATCC GGAGGCAGGG CTTCCGGGCT TGGACGCTCG GCAGGGTGGA GGCGGTGCGG
CGCAGCGCGC CGGAGTCCGC CCGCGTCCCG GTCACGCCGG CGCGCCTGGT GGCCGGTGGT
GCGGCGACCG CGCTGCTGAT GGGCGGTGTG GCCGTGGCGA CGGCCCCGGA CAAGACCGAG
ACGCAGCTGG CCATCGAGGC CAACGAGAAG GCGCTGGCCG AGCTGGAGCC CGAGGTGCCG
GTGCCCAGTT CCGTGCCGGT CGAGACGGTC GGCCCCGGCG GCCCGTCGTC GTCCTCCGGC
AGTGGTGCCG ACCCGTCGGG GGAGTCCGGT GACGGAGAGT CGGGCTCGTC CGGTGACGAG
CCGAGTGGGT CGGACGGCTC CTCCGACGAC GGTTCCGCGA GCCCCGAGCC CTCCGAGCCG
GCCCCGACCG CCTCGTCGAA CGGCCCCGGG CAGGACGAGT CGGGCGAGGG CGAGTCCGGC
CAGGGCCCGT CGGGTGAGGG CGAATCCCGC GAGGACGAGG CCGGGTGGTA CGTGCCGCGG
GGCGACCAGG TCACTGTCTT CGGGGACTCC CTGGTGGTCT CGAGCCTCTA CGGCTTCCAG
GACAAGTTCC CCGGGGTGCA GCTGGTGGCG AAGTCCAACC GGCAGTGGCC GGAGGGTCGG
GCGCTGGTCC GGGCACACCT CGATGCGGGA TCCGTGCGGG ACTCGGTGGT GCTGTCCTAC
GGCACCAACG CCGGGGTGCG CGAGCCGGAG ATCGTGCGAG AGACGCTCGA CCTGCTTGGG
CCCGAGCGGC AGGTGGTGCT GGTGAACCTG TACGGCAAGT CGTCCTGGAT CGGGGAGTCG
AACGACAACC TGCAGCAGAT CGCGGACGAG TACCCGAACG TCGCCGTGGC CGACTGGCAC
TCCCTCGCCT CGGAGAACCC GGGGTACCTG CAGAGCGACG GTGTACACCC CGACATCGAG
GGCGCCAACG CCTATGCCCT CCTCGTGAAG GAGACCTTCG CCGCGCAGGC GGGGGAGTGA
|
|---|
| Protein sequence | MSPEHREPEL GRPVPSGQPV AGFGSGPADS GRIQGLDGLR ALAVGLVVVY HLLPDRLPGG
FIGVDVFFVI SGFLITTLLL REVRRNGYMN MPTFWMRRIR RLLPALVLVL LVCTALVWIV
DVTRGGDLRV GLGRQVLGGL TFTTNWVEIA HGTSYFDQNQ PVLYKPLWSL AVEEQFYLLW
PPALALMLVL SARWRPRLLM VLGLGMGSAL WMAVLYFTAE DVTRPYYGTD SHLFGLMAGV
LVSFWWMSRG SWLRSRAWWR WRGPAGLAAL AGVLLLSRVM PEDRAVTYLG GLVLASVLTA
VVIASLLPGR TWLHTLLELR PMEWVGERSY GLYLWHWPVL LLMLAALPAQ EAGSLGYWML
RLVAVVLTVA VAELSYRWVE TPIRRQGFRA WTLGRVEAVR RSAPESARVP VTPARLVAGG
AATALLMGGV AVATAPDKTE TQLAIEANEK ALAELEPEVP VPSSVPVETV GPGGPSSSSG
SGADPSGESG DGESGSSGDE PSGSDGSSDD GSASPEPSEP APTASSNGPG QDESGEGESG
QGPSGEGESR EDEAGWYVPR GDQVTVFGDS LVVSSLYGFQ DKFPGVQLVA KSNRQWPEGR
ALVRAHLDAG SVRDSVVLSY GTNAGVREPE IVRETLDLLG PERQVVLVNL YGKSSWIGES
NDNLQQIADE YPNVAVADWH SLASENPGYL QSDGVHPDIE GANAYALLVK ETFAAQAGE
|
|---|
| |