| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ksed_15440 |
|---|
| Symbol | thrS |
|---|
| ID | 8373050 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Kytococcus sedentarius DSM 20547 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013169 |
|---|
| Strand | - |
|---|
| Start bp | 1584295 |
|---|
| End bp | 1586277 |
|---|
| Gene Length | 1983 bp |
|---|
| Protein Length | 660 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 644991812 |
|---|
| Product | threonyl-tRNA synthetase |
|---|
| Protein accession | YP_003149329 |
|---|
| Protein GI | 256825369 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0441] Threonyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00418] threonyl-tRNA synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 0.374739 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCCCCA TCAGTCTGAC CGTGAACGGC GCATCCCGTA CGGCCGAGAC GGGGACCACC
GGCACCGATC TGTTCGGGGA CGACCGCCGC GTGGTGGCGA CCCGGGTGAA CGGCGAGCTG
CGGGACCTCT ACCGGGAGGT CGCCGACGGC GACGAGGTCG AGGCCGTGCT CATCGACGAG
CCCGACGGCC TGGACATCCT GCGCCACTCC GCCGCCCACG TGCTGGCGCA GGCGGTGCAG
CAGGAGTTCG CGGACGCCAA GCTCGGCATC GGCCCGCCCA TCACCGACGG CTTCTACTAC
GACTTCGACG TCGCCGAGCC CTTCACCCCC GAGGACCTGA AGAAGCTCTC CAAGACGATG
CAGCGCATCA TCAACGAGGG GCAGACCTTC GTGCGCCGTG AGGTCTCCGA CGCGGACGCC
CAGGTGGAGC TGGCCGGCGA GCCCTACAAG GTGGAGCTGA TCGGCCTCAA GGGCGGCAGC
GCCGAGGAGG CCGCCGAGGG TGCCTCGGCC GAGGTGGGCG GCGCCCAGCT CACCATCTAC
GACAACGTGC GCAAGGACGG CACCGTGGCC TGGGGAGACC TCTGCCGCGG CCCGCACCTG
CCCAGCACCA AGCTCATCGG CAACGGCTTC GCGCTCACCC GCTCGGCGGC GGCCTACTGG
CGCGGCTCGG AGAAGAACCC GCAGCTGCAG CGCGTCTACG GCACGGCCTG GCCCTCCAAG
GAGGAGTTGA AGGCCTATCA GGAGCGCCTC GCCGAGGCCG AGCGCCGTGA CCACCGCAAG
CTCGGTGCCG AGATGGACCT CTACAGCTTC CCCGAAGAGG TCGGTCCCGG CCTGCCGGTC
TTCCACCCCA AGGGCGCCAT CCTGCGGCGC ACCATGGAGG ACTACGTCTG GAAGCGCCAC
GTGGAGGAGG GCTTCTCCTA CGTGACCACC CCGCACCTGT CCAAGGAGGG GCTGTTCCAC
ACCTCGGGCC ACCTGCCCTA CTACGCCGAC GGCATGATGC CCGAGCTCGA CGACGACGGG
CAGGCCTACC GCATCAAGGC CATGAACTGC CCGATGCACA ACCTGATCTA CCGCTCCCAG
CAGCGTTCCT ACCGCGAGCT GCCGCTGCGA TACTTCGAGT TCGGCACGGT GTACCGCAAC
GAGAAGTCCG GCGTGTTGCA GGGGCTCACC CGCGTCCGCA TGATCACCCA GGACGACTCG
CACTCCTACG TGACGCGCGA GCAGGCGCCC GGCGAGGTGA AGCACCTGCT GGACTTCGTG
CTCTCGCTGC TGCGCGACTT CGGCATGGAC GACTACTACC TGGAGCTCTC CACGCGCGCC
GAGGAGGGTG ACAAGAAGGA CAAGTTCATC GGCACCGACG AGCAGTGGGC CGAGGCCACC
GCGGTGCTGG AGCAGGTCGC GACCGAGACC GGGCTCGAGC TCGTGCCGGA CCCGGGTGGC
GCCGCCTACT ACGGGCCCAA GATCTCGGTG CAGGCGCGGG ACGCCATCGG GCGCACCTGG
CAGATGTCGA CCATCCAGTA CGACTTCAAC CAGCCCGAGC GCTTCGGCCT GGAGTACTCG
GCGGCGGACG GCACGCGCCA GCAGCCGGTG ATGATCCACT CGGCCAAGTT CGGGTCCATC
GAGCGCTTCA TCGGCGTCCT GGTGGAGCAC TACGCCGGGC AGTTCCCGGT GTGGCTCGCC
CCGGTGCAGG TGCTGGGCGT CCCGGTGGCC GAGGACTTCC AGCCCTACCT CGAGGACGTC
CTGGCCCAGA TGCGGGCCCA GGGGATCCGC ACCGAGATCG ACGCCAGCGA CGACCGCTTC
CCCAAGAAGA TCCGCAACGC GAGCAAGTCG AAGGTGCCCT TCACCCTCAT CGCCGGTGGC
GAGGACCGCG ATGCGGGCGC CGTCTCCTTC CGCTTCCGCG ATGGTTCCCA GGAGAACGGG
GTCCCGGTGG CCGACGCGAT CGCCCGGATC CGCGAGGCGA TCGACACCCG CGCCCAGGTC
TGA
|
|---|
| Protein sequence | MAPISLTVNG ASRTAETGTT GTDLFGDDRR VVATRVNGEL RDLYREVADG DEVEAVLIDE
PDGLDILRHS AAHVLAQAVQ QEFADAKLGI GPPITDGFYY DFDVAEPFTP EDLKKLSKTM
QRIINEGQTF VRREVSDADA QVELAGEPYK VELIGLKGGS AEEAAEGASA EVGGAQLTIY
DNVRKDGTVA WGDLCRGPHL PSTKLIGNGF ALTRSAAAYW RGSEKNPQLQ RVYGTAWPSK
EELKAYQERL AEAERRDHRK LGAEMDLYSF PEEVGPGLPV FHPKGAILRR TMEDYVWKRH
VEEGFSYVTT PHLSKEGLFH TSGHLPYYAD GMMPELDDDG QAYRIKAMNC PMHNLIYRSQ
QRSYRELPLR YFEFGTVYRN EKSGVLQGLT RVRMITQDDS HSYVTREQAP GEVKHLLDFV
LSLLRDFGMD DYYLELSTRA EEGDKKDKFI GTDEQWAEAT AVLEQVATET GLELVPDPGG
AAYYGPKISV QARDAIGRTW QMSTIQYDFN QPERFGLEYS AADGTRQQPV MIHSAKFGSI
ERFIGVLVEH YAGQFPVWLA PVQVLGVPVA EDFQPYLEDV LAQMRAQGIR TEIDASDDRF
PKKIRNASKS KVPFTLIAGG EDRDAGAVSF RFRDGSQENG VPVADAIARI REAIDTRAQV
|
|---|
| |