Gene Ksed_15360 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_15360 
Symbol 
ID8373042 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1578215 
End bp1578853 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content73% 
IMG OID644991804 
Productpyridoxal phosphate synthase yaaE subunit 
Protein accessionYP_003149321 
Protein GI256825361 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0311] Predicted glutamine amidotransferase involved in pyridoxine biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value0.132239 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGACTC CGCTCATCGG GGTCCTGGCC GTCCAGGGCG ACGTGCGCGA GCACGTCGAG 
GCCCTCGAGG CCCGTGGCGC CTCCACCCTG CGGCTGCGCC GCCCCGAGGA GGTCGACCGC
ATCGACGGGC TGGTCGTCCC CGGGGGTGAG TCCACCGTCA TGGACAAGCT CTGCCGGCTG
TTCGGCCTGG TCGCGCCGCT GCGGGACCGC ATCGCCGACG GCCTGCCGGT CTACGGCTCG
TGCGCGGGCA TGATCATGCT CGCCGACGGC GTGCTTGACG GGCACCGCGA CCAGCAGACC
CTCGGCGGCA TCGACATGAC GGTGCGGCGC AACGCCTTCG GGCGCCAGGT GGACTCCTTC
GAGACCGACC TGTCGATGCC GGTGCTGGGG GAGGACGCCG ACCCGGTGAC GGCGGTGTTC
ATCCGTGCCC CGTGGGTGGA GCAGGTGGGG GACCGGGTGG AGGTCCTGGC CCGGGTGCCC
CACCGGGCCG TGGCCGGTGA CGCCGCGAAG GAGGCGGCGG CCGACCGCAT CGTGGCCGTG
CGGCAGGGGA ACCTGCTCGC GACCTCCTTC CACCCCGAGG TGACCGGCGA CCGTCGCGTG
CACGAGCTGT TCGTCCAGAT GGTGCGCTCT GCCGCCTGA
 
Protein sequence
MTTPLIGVLA VQGDVREHVE ALEARGASTL RLRRPEEVDR IDGLVVPGGE STVMDKLCRL 
FGLVAPLRDR IADGLPVYGS CAGMIMLADG VLDGHRDQQT LGGIDMTVRR NAFGRQVDSF
ETDLSMPVLG EDADPVTAVF IRAPWVEQVG DRVEVLARVP HRAVAGDAAK EAAADRIVAV
RQGNLLATSF HPEVTGDRRV HELFVQMVRS AA