Gene Ksed_15350 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_15350 
Symbol 
ID8373041 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1577289 
End bp1578044 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content68% 
IMG OID644991803 
Productconserved hypothetical protein TIGR01033 
Protein accessionYP_003149320 
Protein GI256825360 
COG category[S] Function unknown 
COG ID[COG0217] Uncharacterized conserved protein 
TIGRFAM ID[TIGR01033] DNA-binding regulatory protein, YebC/PmpR family 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value0.144785 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCGGTC ACTCCAAGTG GGCAACCACC AAGCACAAGA AGGCGGCGAT CGACGCCAAG 
CGCGGCAAGT TGTTCGCCAA GCTCGTCAAG AACATCGAGG TCGCGGCACG CACCGGCGGG
GCCGACCCCA CGGGCAACCC GACGCTGTTC GACGCCATCC AGAAGGCGAA GAAGAACTCG
GTGCCCAACG ACAACATCGA GCGCGCGGTC AAGCGTGGCT CCGGGGCCGA GGCGGGCGGG
GCCGAGTACC AGGCCCTGAC CTACGAGGGC TACGCACCCG GCGGCGTGGG CCTCATCATC
GAGTGTCTCA GCGACAACAA GAACCGCGCC GTGATGGAGG TGCGCACGGC CCTGACCCGC
AACGGTGGGC AGATGGCCGA CTCCGGGTCC GTGACCTTCA ACTTCCACCG CAAGGGTGTC
ATCGCGGTTA GCGGCGGCGA GAAGTCCGAG GACGAGCTCA TGGAGATCGT GCTCGAGGCC
GGTGCCGAGG AGATGACGGA CCTGGGCGAG GGCTTCGAGA TCACCACCGA GCCCTCGGAC
ATGGTGGACG TGCGCACCGC CCTGCAGCAG GCGGACGTGG ACTACGACTC CGCGGACGTG
AAGATGCTGC CGATCACCCC CATCGAGCTC GATGCGGACG GGGCACGCAA GCTGTTCCGG
CTGATCGACG CGCTGGAGGA CTGCGACGAC GTGCAGGAGG TCTACGCCGC GGCCGACGTC
CCGGACGCGG TGCTGGCGCA GCTGGACGAG GACTGA
 
Protein sequence
MAGHSKWATT KHKKAAIDAK RGKLFAKLVK NIEVAARTGG ADPTGNPTLF DAIQKAKKNS 
VPNDNIERAV KRGSGAEAGG AEYQALTYEG YAPGGVGLII ECLSDNKNRA VMEVRTALTR
NGGQMADSGS VTFNFHRKGV IAVSGGEKSE DELMEIVLEA GAEEMTDLGE GFEITTEPSD
MVDVRTALQQ ADVDYDSADV KMLPITPIEL DADGARKLFR LIDALEDCDD VQEVYAAADV
PDAVLAQLDE D