Gene Ksed_14230 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_14230 
Symbol 
ID8372931 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1470726 
End bp1471496 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content70% 
IMG OID644991697 
Producthypothetical protein 
Protein accessionYP_003149215 
Protein GI256825255 
COG category[S] Function unknown 
COG ID[COG2357] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.00309565 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.00445138 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGCCAACG ACGTGCCCAT GACCTCGATC GACCTCGTGA TGGCGCTCGC CGGGGACGAC 
GTGGAGGAAC GCGACCCCGA CGAGGTGGCC CGCGCCATCG GCGCCCGGCT CTCGGAGTTC
CGGCTGCGCT ACAAGTTCGC GCTGGACGAG GTGCTCACCA AGATCGACAT CCTCGCCGAG
GAGGCCGAGG CGCGGGGGAC GCGCGGCCCC ATCGAGCACG TGAAGCACCG GGTGAAGTCC
TTCGACTCGA TCCTGCACAA GATGAACCGG CTGGGCTGCG GCCCGGACCT CGACGTGGTG
GCCACCGAGA TCCGCGACAT CGCCGGGGTG CGCGTGACCT GCCCGTACAT CGAGGACACC
TTCCGGCTGG CCGAGATGCT GATGGGCCAG CCCGACCTGA CGGTCTTGGA GACCAAGGAC
TACATCTCCC ACCCCAAGCC CAACGGCTAC CGCTCGCTGC ACCTGATCGT CACCGTGCCG
GTATTCCTGG CCGAGGAGAC CCTGGAGGTG CCGGTGGAGA TCCAGATCCG CACCATCGCC
ATGGACTTCT GGGCGAGCGT GGAGCACCAG ATCCGGTACA AGTACCACGA CGAGGTGCCC
GATGACGTGG GCGAGACCCT CCGGGAGTCC GCCGTCACCG CGTGGGAGCT CGACCGGCAG
ATGTCCGGCC TGCGGCAGAC CGTGCGCGCC CGCGAGAGCG GTGCGGCCGT GGCCGTCTCG
CCACCGGGTG CCCAGCGCGC CGGGGCGGAC CCGGCGCCCG ATGTCGCCTG A
 
Protein sequence
MANDVPMTSI DLVMALAGDD VEERDPDEVA RAIGARLSEF RLRYKFALDE VLTKIDILAE 
EAEARGTRGP IEHVKHRVKS FDSILHKMNR LGCGPDLDVV ATEIRDIAGV RVTCPYIEDT
FRLAEMLMGQ PDLTVLETKD YISHPKPNGY RSLHLIVTVP VFLAEETLEV PVEIQIRTIA
MDFWASVEHQ IRYKYHDEVP DDVGETLRES AVTAWELDRQ MSGLRQTVRA RESGAAVAVS
PPGAQRAGAD PAPDVA