Gene Ksed_14210 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_14210 
Symbol 
ID8372929 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1468844 
End bp1469776 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content75% 
IMG OID644991695 
Productconserved hypothetical protein TIGR01777 
Protein accessionYP_003149213 
Protein GI256825253 
COG category[R] General function prediction only 
COG ID[COG1090] Predicted nucleoside-diphosphate sugar epimerase 
TIGRFAM ID[TIGR01777] conserved hypothetical protein TIGR01777 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.000253357 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.00429044 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAGCACCC TGCGCACGGT CGTGCTCGCC GGGGCCTCCG GCTTCATGGG GCAGCACCTG 
CGGGCCCGCC TCGTGGCCGA TGGGGTGCAC GTGCGCACCA TCGGCCGCTC CGTGGACGCC
GACGCGCGCT GGGGGCAGGG GCTCAGCGGC GTGCTCGAGG ACGCCGATGC GCTGGTGAAC
CTCGCCGGCC GGTCGGTCAG CTGCCGCTAC ACGAAGGCCA CCATCGACGA GATCTTCACC
AGCCGCACGC AGACCACCCG GGCGCTGGGG GAGGCGCTCG CCGCGTGCGA CGCGCCACCG
GCGGTGTGGG TGAACGCCTC CACAGGCACC ATCTACCGCG ACGCCCGCGA CCGCCCGCAG
GACGAGGCCA CCGGGGAGCT CGGGACCGGG TTCTCGGTGG AGGTCGCGCG GGCCTGGGAA
CGCGAGTTGT TCACGCCCCG GCTGCCCGCG GTGCGTCGGG TGGCGCTGCG CACCTCCATC
GTGCTCGGGA ACGGCGGGGC GCTGAACGCG ATCGTGAACC TCGCACGGCT CGGCGCCGGC
GGCCACCAGG GGGACGGCGG CCAGGTCTTC AGCTGGGTCC ACCTGGAGGA CGTGTACCGC
GCAGTGCGGC ACGTGCTGGC CGACGAAGGC ACCAGCGGCC CGGTGAACCT GGCGACCCCG
CACCCGGTGA CCAACGCCGA GCTGATGCGC ACCGTCCGCG CGCACTTCGG CGGTCTGGGG
GAGCGCGTCG GCCTGCCGAC CCCGGCGTGG GCGCTGGGGC TGGGCGGTCG GGTGATCCGC
ACCGAGCCGG AGCTCGTGCT CAAGAGCCGC TGGGTCCACC CCGGGGTGCT GCTGGACTCC
GGGTTCACCT GGGCGTTCCC CACCCTGGAC GAGGCGCTCG CGGACATCGC CGCCACCACC
CCGCGTGGCC TGCTCCCGGT GCAGCTCGGC TGA
 
Protein sequence
MSTLRTVVLA GASGFMGQHL RARLVADGVH VRTIGRSVDA DARWGQGLSG VLEDADALVN 
LAGRSVSCRY TKATIDEIFT SRTQTTRALG EALAACDAPP AVWVNASTGT IYRDARDRPQ
DEATGELGTG FSVEVARAWE RELFTPRLPA VRRVALRTSI VLGNGGALNA IVNLARLGAG
GHQGDGGQVF SWVHLEDVYR AVRHVLADEG TSGPVNLATP HPVTNAELMR TVRAHFGGLG
ERVGLPTPAW ALGLGGRVIR TEPELVLKSR WVHPGVLLDS GFTWAFPTLD EALADIAATT
PRGLLPVQLG