| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ksed_14170 |
|---|
| Symbol | |
|---|
| ID | 8372925 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Kytococcus sedentarius DSM 20547 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013169 |
|---|
| Strand | - |
|---|
| Start bp | 1464895 |
|---|
| End bp | 1465830 |
|---|
| Gene Length | 936 bp |
|---|
| Protein Length | 311 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 644991691 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003149209 |
|---|
| Protein GI | 256825249 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 0.00613432 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.00859311 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGCACACCT CCCTCCCACA CGCCTCCGGC CTCCAGCGGG CGCTGCGCGT CGTGCGTCGC
CTCGCGGGCC AGCTGGACCG GCGCATCCTG CCGGACACCC CGGCCACCCG CCCGGCGGTG
CTGCGCATCG CCACCGGCGC GTACACGGCC TGGTACCTGC GCCCCCGCAT CCGGATGTTC
GCCAAGGTGC ACCGCACCGA TCCCGCGCTG TTCGCCCCCG TGGGGCCCTG CAAGGTCCTG
CGCCGGCCGC TGCCGCCGCG CGTGGCCGAC GCCCTGGTGT GGGCCACGAT GGCGACGGAC
CTCGCGTTCA CCGTGGGCAT CCGCCACCGC GTCGTCGGCC CCCTGCACGC CGGGCTGCTG
CTGTGGACGC TGTCCTACCG CAACTCGTGG TCGATGATCT TCCACAACGA CAACAACCTG
GCGCTGCACA CCGCCGTCCT GGGGTTCACC CGCAGCGCCG ACGCCCTGGC CCCGGGCGCC
CGGGCCGTCG GGGGCCCGGC CGGCAACTGG CGCTACGCCG CGCCGCACCG CGGCATGCAG
GCGGTCACGC TGGTCACCTA CTGGCTGGCG GGCGTGGCGA AGGTCCGCGG TGCCTCCGGG
TGGGCGTGGG CCCGCGGCGA GGGCATGCGC CGCCAGGTGG CGGCCGACGG GCTGCGCAAG
GAGCTCCTGG GCTCCTCGGC CGGTGGCCTG GGGCTGCGCC TGTACCCGTA CACCCGGCTG
TGGACGGTGC TGGCGACCGG GTCGCTCCTG CTGGAGCTGC TGGCACCGCT GGTGATGCTG
GACCGCCGCG CCGGGCGGCT CTGGGCGGTG GGTGCCTGGG GCATGCACTG GGGCATCTAC
CTGGTCATGA ACATCACCTT CCGCCACAAC CTCTCCGGGG TGATGTACCT GCCGTGGTTC
CCGGTCGAGA AGGCGCTGGG CCGGCTCGGG CGCTGA
|
|---|
| Protein sequence | MHTSLPHASG LQRALRVVRR LAGQLDRRIL PDTPATRPAV LRIATGAYTA WYLRPRIRMF
AKVHRTDPAL FAPVGPCKVL RRPLPPRVAD ALVWATMATD LAFTVGIRHR VVGPLHAGLL
LWTLSYRNSW SMIFHNDNNL ALHTAVLGFT RSADALAPGA RAVGGPAGNW RYAAPHRGMQ
AVTLVTYWLA GVAKVRGASG WAWARGEGMR RQVAADGLRK ELLGSSAGGL GLRLYPYTRL
WTVLATGSLL LELLAPLVML DRRAGRLWAV GAWGMHWGIY LVMNITFRHN LSGVMYLPWF
PVEKALGRLG R
|
|---|
| |