Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ksed_13910 |
Symbol | |
ID | 8372899 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Kytococcus sedentarius DSM 20547 |
Kingdom | Bacteria |
Replicon accession | NC_013169 |
Strand | + |
Start bp | 1438084 |
End bp | 1438782 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644991665 |
Product | haloacid dehalogenase superfamily protein, subfamily IA, variant 3 with third motif having DD or ED |
Protein accession | YP_003149183 |
Protein GI | 256825223 |
COG category | [R] General function prediction only |
COG ID | [COG0637] Predicted phosphatase/phosphohexomutase |
TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED |
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Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 0.491881 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGGGCT GCCACACTGT GGCGGTGTCA TCGCAGCCCC ACACTCCCAG CCAGCCCGCC GCCGTCCTGT TCGACATGGA CGGCACCCTC ATCGACACCG AGCCGATGTG GATGGCCGCC GAGACGGCCC TCGTCGAGGA GCACGGCGGC ACCTGGACCC ACGACGACGC GCTGGCGATG GTCGGCAACC CGCTGGAGGT CTCGGCCCGC ATCATCCTGG ACCGGACGCC GGTGACCCTC ACCGAGGGCG AGATCATCGA GCGCCTGCTC CGGGAGGTCA GCGACCAGGT CGCCGCCGGG GTGCCGTGGC GGCCCGGGGC GCGCGAGCTG TTGGGCGAGT GCGTCGAGCG GGGCATCCCC ACCGCCCTGG TCACCATGTC CTGGACCCTG CTGGCCGACA CCTTCACCGC CACCCTGCCC GCGGGGACCT TCACCACCGT GGTCACCGGT GACGCGGTCT CGGCCGGCAA GCCCGACCCG GAGCCCTACC TGACCGCCGC CGAGCGGCTC GGCGTCGACC CCACGGAGTG CCTGGCCCTG GAGGACTCGC CCTCCGGCGT GGGCTCGGCC TCGGCGGCGG GAACCAACCT GGTGGCCATC CCGCTCATGG TGGACCTGCC CGAGACGCCC AACACGATCA CCGTCGACAC CCTGGACGGG GAGACGGTCG ATTCACTGTG GGGCCGCTTC AGCCGCTGA
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Protein sequence | MQGCHTVAVS SQPHTPSQPA AVLFDMDGTL IDTEPMWMAA ETALVEEHGG TWTHDDALAM VGNPLEVSAR IILDRTPVTL TEGEIIERLL REVSDQVAAG VPWRPGAREL LGECVERGIP TALVTMSWTL LADTFTATLP AGTFTTVVTG DAVSAGKPDP EPYLTAAERL GVDPTECLAL EDSPSGVGSA SAAGTNLVAI PLMVDLPETP NTITVDTLDG ETVDSLWGRF SR
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