Gene Ksed_13850 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_13850 
Symbol 
ID8372893 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1432724 
End bp1434037 
Gene Length1314 bp 
Protein Length437 aa 
Translation table11 
GC content72% 
IMG OID644991659 
Producthypothetical protein 
Protein accessionYP_003149177 
Protein GI256825217 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0000318209 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTGGACC TCTGCCGGGA GCTGATCCGC ATCGACAGCA CGAACTACGG GGACGGCACC 
GGGCCGGGGG AGCGCGAGGC GGCCGACTAC GTGGTCGACC GGCTCACCGA GGTGGATCTG
GAGCCGCAGG TGTTCGAGTC GGACCCGGGC CGCACCAGCG TGGTCGTGCG CCTGCCCGGC
AAGAACCCCG AGCGGCCGGG CCTGGTGCTG CACGGGCACC TGGACGTGGT CCCCGCCGAG
GCCGCCGACT GGTCGGTGGA CCCCTTCGCC GCCGAGCTCA AGGACGGCAT GGTCTGGGGC
CGCGGTGCCG TGGACATGAA GGACATGGAC GCCATGATCC TGGCGGTCGT GCGGTACCTC
GCCCGCACGG GCACCCAGCC GGACCGTGAC CTGGTGGTCG CGTTCTTCGC CGACGAGGAG
GCCGGCGGCG TCAAGGGCGC CGGGCACCTG GTGGAGCACC ACCCGGAGCT GTTCGCCGGG
TGCACTGAGG CCGTCTCCGA GGTGGGGGGT TTCTCCATCA CGGTCCCCGG CCAGGCGCTC
GCCGCGGGCG CCGAGCCGCA GCGCACCTAC CTCGTGCAGA CCGCGGAGAA GGGCATCGCC
TGGCTCACCC TCACCGCCCG CGGGCGCGCC GGCCACGGGT CGGTGCCCAC CCAGGACAAC
GCCGTGGTGC ACATGTCCCG CGCACTGACC GCCATCCACG AGCACGAGTG GCCGGCCGAG
ACCATCGAGT CCGTCCGGGT GCTGCTGGAG GGCGTGGGGG AGCAGGCCGG CATCGACTGG
TCCGTCGACG ACGCCCCCTC GCTGACCGAG GTGGTGGGCG CCACCGGGGG AGCCCACGCC
TTCGTCAAGG GCACGCTGCG CAACACGATC AACCCGACGA TGGTCTCCGG CGGGTACAAG
CACAACGTGG TGCCGCAGAC GGTCACCGCA GGACTCGACT GCCGGTACCT GCCGGGCCAG
TGGGAGCAGG TGCTCGCCAC CATCCAAGAG CTGGCCGGGG AGCACGTGGA GGTGGGCATC
CACCACCTGG GCCCCTCCCT GGAGGCCGAC TTCGACACCC CCCTGGTGGA CACGATGCGG
GCCGCACTGG AGGCCGAGGA CCCCGGGTGC CGTGTGCTGC CCTACTGCCT GTCGGGCGGC
ACCGACAACA AGCACTTGGG TGACCTGGGG ATCACCGGCT ACGGCTTCGT GCCCCTGCAG
CTGCCGGCCG ACCTGGACTT CGCGCCGCTC TTCCACGGCA TCGACGAGCG GGTCCCGGTC
AGCGCGTTGG AGTTCGGCGC GCGGGTACTC CACCGCTTCG TGATGGAGGC CTGA
 
Protein sequence
MVDLCRELIR IDSTNYGDGT GPGEREAADY VVDRLTEVDL EPQVFESDPG RTSVVVRLPG 
KNPERPGLVL HGHLDVVPAE AADWSVDPFA AELKDGMVWG RGAVDMKDMD AMILAVVRYL
ARTGTQPDRD LVVAFFADEE AGGVKGAGHL VEHHPELFAG CTEAVSEVGG FSITVPGQAL
AAGAEPQRTY LVQTAEKGIA WLTLTARGRA GHGSVPTQDN AVVHMSRALT AIHEHEWPAE
TIESVRVLLE GVGEQAGIDW SVDDAPSLTE VVGATGGAHA FVKGTLRNTI NPTMVSGGYK
HNVVPQTVTA GLDCRYLPGQ WEQVLATIQE LAGEHVEVGI HHLGPSLEAD FDTPLVDTMR
AALEAEDPGC RVLPYCLSGG TDNKHLGDLG ITGYGFVPLQ LPADLDFAPL FHGIDERVPV
SALEFGARVL HRFVMEA