Gene Ksed_13680 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_13680 
Symbol 
ID8372876 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1418952 
End bp1420016 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content61% 
IMG OID644991643 
Producthypothetical protein 
Protein accessionYP_003149161 
Protein GI256825201 
COG category[V] Defense mechanisms 
COG ID[COG0732] Restriction endonuclease S subunits 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value0.247083 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.424884 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTCAACA AGATGTCTAT CCGAGATGGA GCGATGGGGC TTGCCCGGGA GGATGGGCTG 
GTCACGTACC ACTACGAGGT GATGCGGCCT CGCCCGGCTG TCGAGGCACG CTACGTCGTT
TACCTTATGA AGTCGTCCTG GTTTGGCGGC GAGTTGATCA AGCGTGAGCG GGGGATCGGT
GCGGGAGGCG CAAAGGGTGT CCGGACGACT GAAGTGCCGT TCCGCGTTCT GAGGACCATC
GACTGCTACA TCCCGACAGT CGAGGGTCAG AGGGCCATCG CTGACTTCCT CGACCGTGAG
ACTGCACAGA TCGACTCCAT GATCGAGGCG CAGAACGTGC TAATGCAAGA ACTGCGCGAA
AGGCAGCGTG CTGCAATCTC AAACACCATT GACTCAGACG CTTCGCTGCA AAGAGTGCCG
CTACGGCGCT TGATCACTGG TATCAGCCAG GGCTGGTCTC CCCAATGCGA AGACACTCCC
GTGGACGATC CGTCGACCCA GTGGTCAGTG CTGAAGGTGG GCTGTGTCAA TGGCGGAGTC
TTTCGTCCTG AGCAGAACAA GATGCTGCCC GGGGATTTGG AGCCTCGTCC AGAACTCGGC
CTGCGTGCCG GTGACCTGCT CATGTCGCGT GGCAATACCC GAGAGTGGGT GGGAAGCGCC
GCCGTCGTTG ATCGGGACTA CCCGACCCTC ATGTTGAGCG ACCTGCTCTA CCGGGTCGCG
GTCGACCGCT CCTTGGTATC CAGCGAGTAC GTCGCCCTCG CTCTAAGTAC CCGCAAGGCC
CGCGATGAGA TCGAGATTGC CGCGAAGGGC GCAAGTCACT CGATGCAGAA AGTTTCTCAG
GGCGATATCC GGTCCACGAC CATTCCCCTT CGCAGCCTTC AGGCACAAGC AGACGTCGTG
AATGAGGCGA GCGCGATAAC AGTAAGAGCC GATGCGATGA TCTCGGCTGC GCAAGAGGTC
ATCGACCTGC TTCGTGAGCG CCGCGAGGCA CTCATCACCG CCGCAGTCAC CGGCAGGATC
GACCCCGAGA CCGGCACTGA ATGCATCGAG GAGGGGGCAG CATGA
 
Protein sequence
MFNKMSIRDG AMGLAREDGL VTYHYEVMRP RPAVEARYVV YLMKSSWFGG ELIKRERGIG 
AGGAKGVRTT EVPFRVLRTI DCYIPTVEGQ RAIADFLDRE TAQIDSMIEA QNVLMQELRE
RQRAAISNTI DSDASLQRVP LRRLITGISQ GWSPQCEDTP VDDPSTQWSV LKVGCVNGGV
FRPEQNKMLP GDLEPRPELG LRAGDLLMSR GNTREWVGSA AVVDRDYPTL MLSDLLYRVA
VDRSLVSSEY VALALSTRKA RDEIEIAAKG ASHSMQKVSQ GDIRSTTIPL RSLQAQADVV
NEASAITVRA DAMISAAQEV IDLLRERREA LITAAVTGRI DPETGTECIE EGAA