Gene Ksed_13540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_13540 
Symbol 
ID8372862 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1405424 
End bp1406410 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content71% 
IMG OID644991629 
Productcyanophycinase 
Protein accessionYP_003149148 
Protein GI256825188 
COG category[P] Inorganic ion transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG4242] Cyanophycinase and related exopeptidases 
TIGRFAM ID[TIGR02069] cyanophycinase 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value0.500388 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.709698 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGATCA TCGGTGGTGC CGAGGACCGC CGGGACATGA TGAAGGTGCA CCGCCGCTTC 
GTGGCCCTCG CGGGGCGCGG GGAGGCCCGG GCGGCGGTCG TGCCGACGGC CTCCGCATTC
CACCGCGAGG CCGGCGAGAC CTACTCGACC CTGTTCGAGC GGCTGGGTGC CCACCACTGT
GACGTGGTGT CCCCGGCGAA CCGGCTGGAC GCCCACGAGG ACCACTGGGT GGAGGTCCTG
GACAACGCCA CCGGCGTGTT CCTCACCGGC GGCAACCAGC TCAAGCTCAG CCAGTTCCTG
GTCGGCACCC CGGTGGGCGA GGCGATCATC CGCGCCCACG AGCGGGGCGC CGTCATCGGC
GGTACCTCGG CCGGCGCCTC GATCCTGAGC CGCCACATGA TCTCCGACGG CGAGGAGGGC
CTGACGCCTC GCCAGGGAGT CAGCAAGCTC ACGCAGGGGC TCGGCCTGGT GGGCGACATC
ATCCTCGACC AGCACTTCGC CGAGCGGGGC CGCTACGGCC GCCTGATGTC GATGGTGGCG
ACCTCCCCGT CGCTGATGGG CATCGGCATC GACGAGGACA CCGCCCTGGA GCTCGCCGAG
GGCACCACCG CCGACGGCGC CGAGATCCGC GAGTTCAGCG TCCACGGTGC CGGCGGCGTG
TTCCTGGTGG ACGCCTCGCG GGCCATGTCG GACGGCCACG AGGCCGCCCC CGGTGCGCCC
CTGCTGCTGT CCGGGGCCAT CGTGCACGCC CTGCCCGCCG GGTCGCTGTT CGACCTGAAC
GCGCGCCGGT TGGTGCACTT CGTGGAGCAG CACCCGCAGG ACGATGCGGT GTACTCAGTG
CGCCAGCAGG CCTCGGAGAT CTCCCAGCTC GAGCGGGCCG CCGAGGACGC GGACGCCTTC
GACGACGAGG AAGTCCTCGA GGCGGCTGCG GACGTGCAGC GTGCCCAACA GACCCAGCTG
CACCTGACGC GAGCGGATGA CGAATGA
 
Protein sequence
MLIIGGAEDR RDMMKVHRRF VALAGRGEAR AAVVPTASAF HREAGETYST LFERLGAHHC 
DVVSPANRLD AHEDHWVEVL DNATGVFLTG GNQLKLSQFL VGTPVGEAII RAHERGAVIG
GTSAGASILS RHMISDGEEG LTPRQGVSKL TQGLGLVGDI ILDQHFAERG RYGRLMSMVA
TSPSLMGIGI DEDTALELAE GTTADGAEIR EFSVHGAGGV FLVDASRAMS DGHEAAPGAP
LLLSGAIVHA LPAGSLFDLN ARRLVHFVEQ HPQDDAVYSV RQQASEISQL ERAAEDADAF
DDEEVLEAAA DVQRAQQTQL HLTRADDE