Gene Ksed_13370 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_13370 
Symbol 
ID8372845 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1387181 
End bp1387942 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content67% 
IMG OID644991612 
ProductIron-regulated ABC transporter ATPase subunit SufC 
Protein accessionYP_003149131 
Protein GI256825171 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0396] ABC-type transport system involved in Fe-S cluster assembly, ATPase component 
TIGRFAM ID[TIGR01978] FeS assembly ATPase SufC 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value0.0871806 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACCC TGGAGATCAA GGACCTGCAC GTCTCGGTCA GCACGGACGA CGGCGAGGAC 
AAAGAGATCC TCAAGGGCGT CACGCTGACG ATCAACTCCG GTGAGACGCA CGCCATCATG
GGCCCCAACG GCTCCGGCAA GTCGACCCTG GCCTACTCGA TCGCCGGCCA CCCGAAGTAC
CAGGTGACCT CCGGCACCAT CACCCTGGAC GGCGAGGACG TGCTGGCCAT GAGCGTGGAC
GAGCGCGCCC GGGCGGGCCT GTTCCTGGCC ATGCAGTACC CGGTGGAGGT GCCGGGCGTG
ACGGTCAGCA ACTTCCTGCG CACCGCGAAG ACCGCCGTGG ACGGCGAGGC CCCCAAGCTG
CGCACCTGGG TCAAGGACGT CAAGAACACG ATGTCCGACC TGCGCATGAA GCCGGAGTTC
GCCGAGCGCG ACGTCAACGC CGGGTTCTCC GGTGGTGAGA AGAAGCGCCA CGAGATCCTG
CAGATGGAGC TGCTGCAGCC GAAGATCGCC GTGCTGGACG AGACCGACTC CGGTCTGGAC
GTCGACGCGC TGCGCATCGT CTCCGAGGGC GTGAACCGCT CCAAGGAGGC CTCGGACATG
GGCGTGCTGC TCATCACGCA CTACACGCGC ATCCTGAACT ACATCAAGCC CGACTTCGTG
CACGTCTTCG TGGACGGCGC CGTGGCCGAG GAGGGCGGCC CGGAGCTGGC CGACCGCCTC
GAGGCCGAGG GCTACGACCG CTACACGCAG GCGGCGGTCT GA
 
Protein sequence
MSTLEIKDLH VSVSTDDGED KEILKGVTLT INSGETHAIM GPNGSGKSTL AYSIAGHPKY 
QVTSGTITLD GEDVLAMSVD ERARAGLFLA MQYPVEVPGV TVSNFLRTAK TAVDGEAPKL
RTWVKDVKNT MSDLRMKPEF AERDVNAGFS GGEKKRHEIL QMELLQPKIA VLDETDSGLD
VDALRIVSEG VNRSKEASDM GVLLITHYTR ILNYIKPDFV HVFVDGAVAE EGGPELADRL
EAEGYDRYTQ AAV