Gene Ksed_13340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_13340 
Symbol 
ID8372842 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1384040 
End bp1385491 
Gene Length1452 bp 
Protein Length483 aa 
Translation table11 
GC content66% 
IMG OID644991609 
ProductIron-regulated ABC transporter membrane component SufB 
Protein accessionYP_003149128 
Protein GI256825168 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0719] ABC-type transport system involved in Fe-S cluster assembly, permease component 
TIGRFAM ID[TIGR01980] FeS assembly protein SufB 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value0.891672 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACGA CGGCCAATGG CACCCCCAGC GGCGCCTCCC ACATCGAGGA GCTGAACCCG 
GGCCTCAAGG ACCTGGGCCG CTACGAGTAC GGATGGCACG ACAGCGACGA CGCCGGAGCG
ACCGCCCAGC GCGGCCTGTC CGAGGCCGTG GTGGAGGACA TCACCACCCG CAAGGGCGAG
CCGGAGTGGA TGCGCACCAT GCGCCTCAAG GCCCTCAAGC TGTTCGACCG CAAGCCGATG
CCCCACTGGG GCTCGGACCT CTCGGACATC GACTTCCAGA ACATCAAGTA CTTCGTGAAG
TCCACCGAGA AGCAGGCCAC CAGCTGGGAC GAGCTGCCCC AGGACATCAA GGACACCTAC
GACAAGCTGG GTATCCCCGA GGCCGAGAAG CAGCGCCTCA TCGCCGGGGT CGCGGCCCAG
TACGAGTCCG AGGTGGTCTA CCACCAGATC CGTGAGGACC TGGAGGAGAA GGGCGTCATC
TTCGTCGACA CCGACACCGC CCTGCGCGAG CACGAGGACC TGTTCCGCGA GCACTTCGGC
AGCGTCATCC CCTCCGGTGA CAACAAGTTC TCCGCACTGA ACACCGCGGT GTGGTCCGGT
GGCTCCTTCA TCTACGTGCC GCCGGGCGTC CACGTGGACA TCCCGCTGCA GGCCTACTTC
CGCATCAACA CCGAGAACAT GGGCCAGTTC GAGCGCACCC TCATCATCGC CGACGAGGGC
TCCTCGGTGC ACTACGTCGA GGGCTGCACC GCGCCGATCT ACCAGTCGGA CTCGCTGCAC
AGCGCCGTCG TGGAGATCAT CGTCAAGAAG AACGCCAAGG TGCGCTACAC GACCATCCAG
AACTGGTCGA ACAACGTGTA CAACCTGGTC ACCAAGCGCG CGACCTGCGC CGAGGGCGCC
ACCATGGAGT GGATCGACGG CAACATCGGC TCCAAGGTGA CGATGAAGTA CCCGGCCGTC
TTCCTGATGG GGGAGCACGC CAACGGCGAG ACCCTCTCGG TCGCCTTCGC CGGGGAGGGC
CAGCACCAGG ACGCCGGCGC CAAGATGGTG CACAACGCCC CGCACACCAC CAGCTCCATC
GTGAGCAAGT CGGTGGCCCG TGGTGGCGGC CGCACCTCCT ACCGCGGCCT GGTGCAGGTC
GCCGAGGGCG CGTACGGCTC GAGGTCGTCG GTGGTCTGCG ACGCCCTGTT GGTGGACCAG
ATCTCCCGCA GCGACACCTA CCCCTACGTC GACATCCGCG AGGACGACGT GCAGATGGGG
CACGAGGCCA CGGTCTCCAA GGTGTCCGAG GACCAGATGT TCTACCTGAT GTCCCGCGGT
GTCTCCGAGA CCGAGGCCAT GGCCATGATC GTGCGCGGGT TCGTCGAGCC CATCGCCCGT
GAGCTGCCGA TGGAGTACGC CCTGGAACTG AACCGCCTGA TCGAGCTGCA GATGGAAGGA
GCCGTCGGCT GA
 
Protein sequence
MTTTANGTPS GASHIEELNP GLKDLGRYEY GWHDSDDAGA TAQRGLSEAV VEDITTRKGE 
PEWMRTMRLK ALKLFDRKPM PHWGSDLSDI DFQNIKYFVK STEKQATSWD ELPQDIKDTY
DKLGIPEAEK QRLIAGVAAQ YESEVVYHQI REDLEEKGVI FVDTDTALRE HEDLFREHFG
SVIPSGDNKF SALNTAVWSG GSFIYVPPGV HVDIPLQAYF RINTENMGQF ERTLIIADEG
SSVHYVEGCT APIYQSDSLH SAVVEIIVKK NAKVRYTTIQ NWSNNVYNLV TKRATCAEGA
TMEWIDGNIG SKVTMKYPAV FLMGEHANGE TLSVAFAGEG QHQDAGAKMV HNAPHTTSSI
VSKSVARGGG RTSYRGLVQV AEGAYGSRSS VVCDALLVDQ ISRSDTYPYV DIREDDVQMG
HEATVSKVSE DQMFYLMSRG VSETEAMAMI VRGFVEPIAR ELPMEYALEL NRLIELQMEG
AVG