Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ksed_13060 |
Symbol | |
ID | 8372814 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Kytococcus sedentarius DSM 20547 |
Kingdom | Bacteria |
Replicon accession | NC_013169 |
Strand | + |
Start bp | 1352855 |
End bp | 1355761 |
Gene Length | 2907 bp |
Protein Length | 968 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644991583 |
Product | Excinuclease ABC subunit A |
Protein accession | YP_003149102 |
Protein GI | 256825142 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0178] Excinuclease ATPase subunit |
TIGRFAM ID | [TIGR00630] excinuclease ABC, A subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCACGC AGAAGGCACC CAGCCGCGAC CGCATCGTGG TGCGTGGAGC CCGCGAGAAC AACCTGAAGA ACGTCTCGGT GGACTTCCCC CGCAACGCGC TGGTGGCGTT CACCGGGCTG TCCGGGTCGG GCAAGTCCTC GCTCGCGTTC GACACCATCT TCGCCGAGGG CCAGCGTCGG TACATGGAGT CGCTGTCGTC CTACGCCCGC CAGTTCCTCG GACAGATGGA CAAGCCGCAG GTCGAGTTCA TCGAGGGCCT CTCGCCGGCG GTGGCGATCG ACCAGAAGTC GACCAGCCGC AACCCCCGCT CGACGGTGGG CACGATCACC GAGGTGCACG ACTACCTGCG CCTGCTGTTC GCCCGCGCCG GCGTGCTGCA CTGCCCGGTC TGCGGTGAGG TCGTGGCGCG GCAGACCACC CAGCAGATCG TGGACCAGCT GGCCGCGGTG CCGGAGGGCA CCCGCTTCCA GGTCCTCGCC CCGGTGGTGC GGGGGCGCAA GGGCGAGCAC GTGGAGCTCT TCTCCGAGCT GCAGACCAGC GGCTTCGCCC GGGCCCGCGT CGACGGCGAG ACGGTGCAGC TCTCCGACCC GCCGAAGCTC GCGAAGACCT ACAAGCACAC CATCGAGGTG GTGGTCGACC GTCTCAAGGC CAAGCAGGTC GACGGTGAGC CGGACCGCCG CTTCATCACC CGCCTGACCG ATTCGGTGGA GACCGCCCTG AAGCTTGCCG AGGGCCGGCT GGTCGTCGAC TACGTCGACG TCGACGCCGA GGGCGACGAG AGCGGCCTGC CACCGGAGCG CGTGCTGTCC GAGCACCTCG CGTGCCCGAA CGAGCACCCC ATCGGCATCG AGGAGATCGA GCCGCGCACG TTCTCCTTCA ACGCGCCCTT CGGCGCCTGC CCCACCTGCC ACGGCATCGG CACCGAGCTC GAGGTCGACC CCGACCTGCT GGTCCCGGAC GAGGAGCTGA GCCTCAACGA GGGCGCGGTC ACGCTGTGGG CCCAGGGCAA GAAGATGGCC GACTACCACC GTCGTGTGGT CGAGGCGCTC TCGCAGGAGC TCGCGTTCGA CATGGACACC CCCTGGCGCG CGCTGCCCCA GCGCGCCCGC CAGGCGATCC TCTTCGGCCA CGAGCACAAG GTGCACGTGC GCTACCGCAA CCGGTTCGGT CGCGAACGCA ACTACTCCAC CGGCTTCGAG GGCGCGGTCA CCCAGGTCAA GCGCCTGCAC GCGGACACCG AGTCCGACCA GATGCGGGAG CGCTACCAGC AGCTGATGCG GCAGATCCCC TGCCCGGACT GCCAGGGCGC GCGCCTGCGT CCCGAGGTGC TCGCGGTCCG CATCGACGGC ATCAACATCG CCGAGCTGTC TCGCCTCTCC ATCGCCGAGG CCGCCCGCTT CCTGGACCAG ATGGAGCTCT CCGAGCAGCA GGCGCGCATC GCGGCGCAGG TGCTCAAGGA GATCCAGGCC CGGCTCGGGT TCCTGCTCGA CGTCGGGCTG GACTACCTCA CGCTGGACCG CGCCGCGGGC TCACTCTCCG GCGGGGAGGC CCAGCGCATC CGCCTCGCGA CGCAGATCGG CGCGGGCCTG GTGGGCGTCC TGTACGTGCT GGACGAGCCC TCCATCGGCC TGCACCAGCG CGACAACCAG CGCCTCATCG ACACCCTCAC GCGCCTGCGT GACCTCGGGA ACACCCTGGT GGTCGTCGAG CACGACGAGG ACACGATCCG CACGTCCGAC TGGGTCATCG ACATCGGGCC GGGCGCCGGG GAGCACGGGG GAGAGGTCGT CTACTCCGGC GAGGTCGAGG GCCTGCTGGA GAGCGACTCC ATCACCGGTG ACTACCTCGC CGGCCGGCGC GCGCTGGAGA CCCCGAGTGT CCGCCGACCG GGCAACGGCC ACCACGTGGA GGTGCGCGGC GCCTCGGAGA ACAACCTGCA CGACGTGGAC GTGCGCTTCC CGCTGGGTAC GTTCACCTGC ATCACCGGGG TGTCCGGCTC GGGCAAGTCC ACCCTGGTCA ACGACATCCT CTACACGACG CTGGCCAACC GGCTGAACGG TGCGCGCCGC ATCCCCGGGC GCCACCGCAC CATCAAGGGG CTGGAGCACC TGGACAAGGT GGTGCACGTC GACCAGAGCC CCATCGGGCG CACCCCGCGG TCGAACCCGG CCACCTACAC CGGGGTCTTC GACAAGGTGC GCTCGCTCTT CGCCGACACC GAGGAGGCCA AGGTCCGCGG GTACGGGCCC GGCCGCTTCA GCTTCAACGT CAAGGGCGGG CGCTGCGAGG CGTGCTCGGG TGACGGCACC CTGCGCATCG AGATGAACTT CCTGCCCGAC GTGTACGTGC CCTGCGAGGA GTGCCACGGC GCGCGCTACA ACCGCGACAC CCTCGAGGTC CACTTCAAGG GCCGGACCAT CGCCGACGTG CTGGCCATGT CCATCGAGGA GGCGCTGGAG TTCTTCGGGG CCATCGGGTC CATCTCCCGG CACCTGCAGA CCCTGGTGGA CGTGGGCCTG GGCTACGTCC GGCTGGGGCA GCCCGCCACC ACGCTCAGCG GTGGTGAGGC GCAGCGGGTG AAGCTGGCGG CCGAGCTGCA GAAGCGCTCC AGCGGCCGGA CGGTCTACGT CCTCGACGAG CCGACCACCG GGCTGCACTT CGAGGACGTC CGGCGCCTGC TGGACGTGCT GCAGTCGCTG GCGGACAAGG GCAACACCGT GCTGGTGATC GAGCACAACC TCGACGTCAT CCGCAGCGCG GACCACATCA TCGACATGGG CCCCGAGGGC GGTGACAAGG GCGGCACCGT CGTGGCCACC GGCACCCCGG AGGAGGTCGC CGCGGTGCCC GAGAGCCACA CCGGCCGCTA CCTCTCCCAG GTGCTCTCGG TGTCCGCCGC GTCCTGA
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Protein sequence | MSTQKAPSRD RIVVRGAREN NLKNVSVDFP RNALVAFTGL SGSGKSSLAF DTIFAEGQRR YMESLSSYAR QFLGQMDKPQ VEFIEGLSPA VAIDQKSTSR NPRSTVGTIT EVHDYLRLLF ARAGVLHCPV CGEVVARQTT QQIVDQLAAV PEGTRFQVLA PVVRGRKGEH VELFSELQTS GFARARVDGE TVQLSDPPKL AKTYKHTIEV VVDRLKAKQV DGEPDRRFIT RLTDSVETAL KLAEGRLVVD YVDVDAEGDE SGLPPERVLS EHLACPNEHP IGIEEIEPRT FSFNAPFGAC PTCHGIGTEL EVDPDLLVPD EELSLNEGAV TLWAQGKKMA DYHRRVVEAL SQELAFDMDT PWRALPQRAR QAILFGHEHK VHVRYRNRFG RERNYSTGFE GAVTQVKRLH ADTESDQMRE RYQQLMRQIP CPDCQGARLR PEVLAVRIDG INIAELSRLS IAEAARFLDQ MELSEQQARI AAQVLKEIQA RLGFLLDVGL DYLTLDRAAG SLSGGEAQRI RLATQIGAGL VGVLYVLDEP SIGLHQRDNQ RLIDTLTRLR DLGNTLVVVE HDEDTIRTSD WVIDIGPGAG EHGGEVVYSG EVEGLLESDS ITGDYLAGRR ALETPSVRRP GNGHHVEVRG ASENNLHDVD VRFPLGTFTC ITGVSGSGKS TLVNDILYTT LANRLNGARR IPGRHRTIKG LEHLDKVVHV DQSPIGRTPR SNPATYTGVF DKVRSLFADT EEAKVRGYGP GRFSFNVKGG RCEACSGDGT LRIEMNFLPD VYVPCEECHG ARYNRDTLEV HFKGRTIADV LAMSIEEALE FFGAIGSISR HLQTLVDVGL GYVRLGQPAT TLSGGEAQRV KLAAELQKRS SGRTVYVLDE PTTGLHFEDV RRLLDVLQSL ADKGNTVLVI EHNLDVIRSA DHIIDMGPEG GDKGGTVVAT GTPEEVAAVP ESHTGRYLSQ VLSVSAAS
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