Gene Ksed_13060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_13060 
Symbol 
ID8372814 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1352855 
End bp1355761 
Gene Length2907 bp 
Protein Length968 aa 
Translation table11 
GC content70% 
IMG OID644991583 
ProductExcinuclease ABC subunit A 
Protein accessionYP_003149102 
Protein GI256825142 
COG category[L] Replication, recombination and repair 
COG ID[COG0178] Excinuclease ATPase subunit 
TIGRFAM ID[TIGR00630] excinuclease ABC, A subunit 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCACGC AGAAGGCACC CAGCCGCGAC CGCATCGTGG TGCGTGGAGC CCGCGAGAAC 
AACCTGAAGA ACGTCTCGGT GGACTTCCCC CGCAACGCGC TGGTGGCGTT CACCGGGCTG
TCCGGGTCGG GCAAGTCCTC GCTCGCGTTC GACACCATCT TCGCCGAGGG CCAGCGTCGG
TACATGGAGT CGCTGTCGTC CTACGCCCGC CAGTTCCTCG GACAGATGGA CAAGCCGCAG
GTCGAGTTCA TCGAGGGCCT CTCGCCGGCG GTGGCGATCG ACCAGAAGTC GACCAGCCGC
AACCCCCGCT CGACGGTGGG CACGATCACC GAGGTGCACG ACTACCTGCG CCTGCTGTTC
GCCCGCGCCG GCGTGCTGCA CTGCCCGGTC TGCGGTGAGG TCGTGGCGCG GCAGACCACC
CAGCAGATCG TGGACCAGCT GGCCGCGGTG CCGGAGGGCA CCCGCTTCCA GGTCCTCGCC
CCGGTGGTGC GGGGGCGCAA GGGCGAGCAC GTGGAGCTCT TCTCCGAGCT GCAGACCAGC
GGCTTCGCCC GGGCCCGCGT CGACGGCGAG ACGGTGCAGC TCTCCGACCC GCCGAAGCTC
GCGAAGACCT ACAAGCACAC CATCGAGGTG GTGGTCGACC GTCTCAAGGC CAAGCAGGTC
GACGGTGAGC CGGACCGCCG CTTCATCACC CGCCTGACCG ATTCGGTGGA GACCGCCCTG
AAGCTTGCCG AGGGCCGGCT GGTCGTCGAC TACGTCGACG TCGACGCCGA GGGCGACGAG
AGCGGCCTGC CACCGGAGCG CGTGCTGTCC GAGCACCTCG CGTGCCCGAA CGAGCACCCC
ATCGGCATCG AGGAGATCGA GCCGCGCACG TTCTCCTTCA ACGCGCCCTT CGGCGCCTGC
CCCACCTGCC ACGGCATCGG CACCGAGCTC GAGGTCGACC CCGACCTGCT GGTCCCGGAC
GAGGAGCTGA GCCTCAACGA GGGCGCGGTC ACGCTGTGGG CCCAGGGCAA GAAGATGGCC
GACTACCACC GTCGTGTGGT CGAGGCGCTC TCGCAGGAGC TCGCGTTCGA CATGGACACC
CCCTGGCGCG CGCTGCCCCA GCGCGCCCGC CAGGCGATCC TCTTCGGCCA CGAGCACAAG
GTGCACGTGC GCTACCGCAA CCGGTTCGGT CGCGAACGCA ACTACTCCAC CGGCTTCGAG
GGCGCGGTCA CCCAGGTCAA GCGCCTGCAC GCGGACACCG AGTCCGACCA GATGCGGGAG
CGCTACCAGC AGCTGATGCG GCAGATCCCC TGCCCGGACT GCCAGGGCGC GCGCCTGCGT
CCCGAGGTGC TCGCGGTCCG CATCGACGGC ATCAACATCG CCGAGCTGTC TCGCCTCTCC
ATCGCCGAGG CCGCCCGCTT CCTGGACCAG ATGGAGCTCT CCGAGCAGCA GGCGCGCATC
GCGGCGCAGG TGCTCAAGGA GATCCAGGCC CGGCTCGGGT TCCTGCTCGA CGTCGGGCTG
GACTACCTCA CGCTGGACCG CGCCGCGGGC TCACTCTCCG GCGGGGAGGC CCAGCGCATC
CGCCTCGCGA CGCAGATCGG CGCGGGCCTG GTGGGCGTCC TGTACGTGCT GGACGAGCCC
TCCATCGGCC TGCACCAGCG CGACAACCAG CGCCTCATCG ACACCCTCAC GCGCCTGCGT
GACCTCGGGA ACACCCTGGT GGTCGTCGAG CACGACGAGG ACACGATCCG CACGTCCGAC
TGGGTCATCG ACATCGGGCC GGGCGCCGGG GAGCACGGGG GAGAGGTCGT CTACTCCGGC
GAGGTCGAGG GCCTGCTGGA GAGCGACTCC ATCACCGGTG ACTACCTCGC CGGCCGGCGC
GCGCTGGAGA CCCCGAGTGT CCGCCGACCG GGCAACGGCC ACCACGTGGA GGTGCGCGGC
GCCTCGGAGA ACAACCTGCA CGACGTGGAC GTGCGCTTCC CGCTGGGTAC GTTCACCTGC
ATCACCGGGG TGTCCGGCTC GGGCAAGTCC ACCCTGGTCA ACGACATCCT CTACACGACG
CTGGCCAACC GGCTGAACGG TGCGCGCCGC ATCCCCGGGC GCCACCGCAC CATCAAGGGG
CTGGAGCACC TGGACAAGGT GGTGCACGTC GACCAGAGCC CCATCGGGCG CACCCCGCGG
TCGAACCCGG CCACCTACAC CGGGGTCTTC GACAAGGTGC GCTCGCTCTT CGCCGACACC
GAGGAGGCCA AGGTCCGCGG GTACGGGCCC GGCCGCTTCA GCTTCAACGT CAAGGGCGGG
CGCTGCGAGG CGTGCTCGGG TGACGGCACC CTGCGCATCG AGATGAACTT CCTGCCCGAC
GTGTACGTGC CCTGCGAGGA GTGCCACGGC GCGCGCTACA ACCGCGACAC CCTCGAGGTC
CACTTCAAGG GCCGGACCAT CGCCGACGTG CTGGCCATGT CCATCGAGGA GGCGCTGGAG
TTCTTCGGGG CCATCGGGTC CATCTCCCGG CACCTGCAGA CCCTGGTGGA CGTGGGCCTG
GGCTACGTCC GGCTGGGGCA GCCCGCCACC ACGCTCAGCG GTGGTGAGGC GCAGCGGGTG
AAGCTGGCGG CCGAGCTGCA GAAGCGCTCC AGCGGCCGGA CGGTCTACGT CCTCGACGAG
CCGACCACCG GGCTGCACTT CGAGGACGTC CGGCGCCTGC TGGACGTGCT GCAGTCGCTG
GCGGACAAGG GCAACACCGT GCTGGTGATC GAGCACAACC TCGACGTCAT CCGCAGCGCG
GACCACATCA TCGACATGGG CCCCGAGGGC GGTGACAAGG GCGGCACCGT CGTGGCCACC
GGCACCCCGG AGGAGGTCGC CGCGGTGCCC GAGAGCCACA CCGGCCGCTA CCTCTCCCAG
GTGCTCTCGG TGTCCGCCGC GTCCTGA
 
Protein sequence
MSTQKAPSRD RIVVRGAREN NLKNVSVDFP RNALVAFTGL SGSGKSSLAF DTIFAEGQRR 
YMESLSSYAR QFLGQMDKPQ VEFIEGLSPA VAIDQKSTSR NPRSTVGTIT EVHDYLRLLF
ARAGVLHCPV CGEVVARQTT QQIVDQLAAV PEGTRFQVLA PVVRGRKGEH VELFSELQTS
GFARARVDGE TVQLSDPPKL AKTYKHTIEV VVDRLKAKQV DGEPDRRFIT RLTDSVETAL
KLAEGRLVVD YVDVDAEGDE SGLPPERVLS EHLACPNEHP IGIEEIEPRT FSFNAPFGAC
PTCHGIGTEL EVDPDLLVPD EELSLNEGAV TLWAQGKKMA DYHRRVVEAL SQELAFDMDT
PWRALPQRAR QAILFGHEHK VHVRYRNRFG RERNYSTGFE GAVTQVKRLH ADTESDQMRE
RYQQLMRQIP CPDCQGARLR PEVLAVRIDG INIAELSRLS IAEAARFLDQ MELSEQQARI
AAQVLKEIQA RLGFLLDVGL DYLTLDRAAG SLSGGEAQRI RLATQIGAGL VGVLYVLDEP
SIGLHQRDNQ RLIDTLTRLR DLGNTLVVVE HDEDTIRTSD WVIDIGPGAG EHGGEVVYSG
EVEGLLESDS ITGDYLAGRR ALETPSVRRP GNGHHVEVRG ASENNLHDVD VRFPLGTFTC
ITGVSGSGKS TLVNDILYTT LANRLNGARR IPGRHRTIKG LEHLDKVVHV DQSPIGRTPR
SNPATYTGVF DKVRSLFADT EEAKVRGYGP GRFSFNVKGG RCEACSGDGT LRIEMNFLPD
VYVPCEECHG ARYNRDTLEV HFKGRTIADV LAMSIEEALE FFGAIGSISR HLQTLVDVGL
GYVRLGQPAT TLSGGEAQRV KLAAELQKRS SGRTVYVLDE PTTGLHFEDV RRLLDVLQSL
ADKGNTVLVI EHNLDVIRSA DHIIDMGPEG GDKGGTVVAT GTPEEVAAVP ESHTGRYLSQ
VLSVSAAS