Gene Ksed_13040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_13040 
Symbol 
ID8372812 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1349967 
End bp1350848 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content75% 
IMG OID644991581 
Productpredicted permease, DMT superfamily 
Protein accessionYP_003149100 
Protein GI256825140 
COG category[R] General function prediction only 
COG ID[COG5006] Predicted permease, DMT superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.0141388 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGCTGG TGGTCGTGGC GGTGCTCAGC GTGCAGGTCG GCGGGGCCTT CGCGGCGACG 
CTGCTGCCCT CGCTGGGGGT GCTGGGCACC ACGGCCCTGC GCTTGGTCAT AGCCGGTGTG
CTGCTGGCCC TGGTCACGCG CCCCCGCCTG AGCGGTCGGA CGGCCGGCGA CTGGCGGGCG
GTGCTCGTCT TCGCCGCGGC GCTGACCCTC ATGAACGCCT TCTTCTACGG CTCCCTGACC
CGCCTGGACA TCGGTGTGGC CGTCACCATC GAGTTCACCG GGCCGCTGCT CATGTCGGCC
GTGCTCTCAC GCAGCCGGCG TGACCTGCTG GCCGTGCTGG CCGCCGCCGC CGGCGTGGTG
CTGGTGAGCG GGGGGTGGCG CCTGCTGGCC GGGGGCGAGG CCGTGGACCC CCTCGGAGCA
CTCCTGGCGG CCCTCGCCGG CGCGTGCTGG TGCGGATACA TCCTGACCAG CGCGCGGGTG
GGTCAGCGCT TCGCCGGCCT GGACGGCATC GCGCTGGCCA TGCTGCTGGG AGCCGTGGTG
ATGGCACCGC TGGGTGTCTG GTCCGCCGGC TCGCGGCTGC TGGAGCCGGA GCTGCTGGTC
GTGGGCCTCC TGGTGGCGCT CGCCTCCTCC GCCATCCCGT ACAGCCTGGA GCTGGTGGCC
CTGCGACGAC TCACTCCCGG CGTCTTCGGG GTGCTGCTCA GCCTCGAGCC GGCCGCCGCT
GCCGGGGCCG GCGTGGTGGT GCTGGGCCAG TGGATGGAGC CGCTGCAGGT GCTCGGCGTC
TCGCTGGTGG TGCTGGCCAG CGTGGTGATC ATGGCCCGCC CCCGCCCCCG CCGCCGTGCC
GAGCCGGGGA ACGACACCGC CGCGACCGCG CAGTCCGACT GA
 
Protein sequence
MALVVVAVLS VQVGGAFAAT LLPSLGVLGT TALRLVIAGV LLALVTRPRL SGRTAGDWRA 
VLVFAAALTL MNAFFYGSLT RLDIGVAVTI EFTGPLLMSA VLSRSRRDLL AVLAAAAGVV
LVSGGWRLLA GGEAVDPLGA LLAALAGACW CGYILTSARV GQRFAGLDGI ALAMLLGAVV
MAPLGVWSAG SRLLEPELLV VGLLVALASS AIPYSLELVA LRRLTPGVFG VLLSLEPAAA
AGAGVVVLGQ WMEPLQVLGV SLVVLASVVI MARPRPRRRA EPGNDTAATA QSD