Gene Ksed_12980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_12980 
Symbol 
ID8372806 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1340133 
End bp1341827 
Gene Length1695 bp 
Protein Length564 aa 
Translation table11 
GC content72% 
IMG OID644991575 
Productformate--tetrahydrofolate ligase 
Protein accessionYP_003149094 
Protein GI256825134 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG2759] Formyltetrahydrofolate synthetase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.700503 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCCTC TGCCCTCAGA CATCGAGATC GCCCGCGACG CCCAGCTCCG CAGCCCCCTC 
GATGTGGCGC AGGACATGGG GATCGACACC GCCCAGCTCG AGCCCTACGG CCACCACGTC
GCGAAGGTGG ACCTCTCCAC CATCGACCAG CTGGCCGACC GGCCGCAGGC CAAGTACGTC
GTGGTGACCG CCGTGACCCC CACGCCCTTC GGCGAGGGCA AGACGACCAC CGCGGTCGGG
CTGGCCCAGG GCCTGGCGAA GGAGGGCCAC TCCCCCGTGC TCGCGCTGCG TCAGCCGTCG
TTGGGCCCGG TCTTCGGCAT CAAGGGCGGG GCCGCCGGCG GTGGCTACTC GCAGGTGGTG
CCCATGGAGG TGCTCAACCT GCACCTGACC GGTGACTTCC ACGCCGTGAC CGCGGCCCAC
GACCTGCTGG CGGCCATGGT CTCCAACCAC CTCCACCACG GCAACGAGCT CGGCATCCAC
ACGGTCGAGT GGCGCCGCGT CCTGGACATC AACGACCGCG CGCTGCGCGC CATCATCGAG
GGCAACGGCG GGCCCATGGA CGGCGTGACC CGCCAGTCCG GCTTCGACAT CACCGCCGCC
AGCGAGGTGA TGGTGATCCT CGCCCTGGCC ACCTCGCTGG CCGACCTGCG CGAGCGTCTC
GGCCGCATCG TCGTCGGCTG GACGAAGGCC GGCGAGCCGG TGACGGCCGA GGACCTCAAG
GCGGCCGGCG CGATGGCGGT GCTGCTGCGC GACGCGCTGA AGCCCAACCT GCTGCAGACC
CTGGAGGGAA CCCCGGCCCT CATCCACACC GGCCCGTTCG GCAACATCGC CACCGGCAAC
TCCTCGGTGG TGGCCGACCG CATCGGCTCC CGGGCCGGGG ACTTCCTGGT GACGGAGGCC
GGGTTCGCCG CCGACATGGG TGCCGAGCGC TTCTTCAACG TGAAGTGCCG CGCCGCCGGC
CTGACCCCGG ACGCCGCGGT CGTCGTGGTC ACGGTCCGCG CGCTCAAGGC CCACTCGGAC
CGCTTCCAGG TGAAGCTCGG CAAGGAGCTG CCCGCGGAGA TGCTGGCCGA GGGACCGGCC
GACGTGGAGG CCGGCGCCCC CAACCTCCGC AAGCACCTGT CCATCATCCG CTCCTTCGGC
GTGCAGCCGG TGGTGGCCAT CAACGCCTTC CCCACCGACC ACGACAGCGA GCACGAGGTG
ATCCGCCGCA TCGCCACCGA GGAGGGCGCC CGCGTGGCGG TCTCCACGCA CGTGGCCGAG
GGCGGCCAGG GCGCGCGCGA GCTCGCCCGC GTGGTCGCCG AGGCCTGCGA GGAGGAGACC
TCCTTCACGC CCACCTACGA GCTCTCCGAC CCGTTGGCCA CCAAAATCGA GAAGATCGCC
ACCGGCGTCT ACGGGGCCGA TGGGGTGAGC TTCGAGCCCG CGGCGCGCAG GGCCCTGGAG
CAGTACACCG AGCGCGGGTA CGGCGAGCTG CCGGTGCTCA TCGCCAAGAC CCAGATGTCG
CTGAGTCACG ACCCGAACCT CAAGGGGGCC CCAACCGGGT GGACCCTGCC GATCCGCGAG
GTCCGCCTCG CCGCGGGCGC CGGCTACGTC TACGCACTGG CCGGGTCGAT CATGACCATG
CCGGGGCTCT CGAAGCACCC GGGTGCCGAG CGCATCGACC TCGACGAGCA GGGGAACGTC
GTCGGCCTGT TCTGA
 
Protein sequence
MTPLPSDIEI ARDAQLRSPL DVAQDMGIDT AQLEPYGHHV AKVDLSTIDQ LADRPQAKYV 
VVTAVTPTPF GEGKTTTAVG LAQGLAKEGH SPVLALRQPS LGPVFGIKGG AAGGGYSQVV
PMEVLNLHLT GDFHAVTAAH DLLAAMVSNH LHHGNELGIH TVEWRRVLDI NDRALRAIIE
GNGGPMDGVT RQSGFDITAA SEVMVILALA TSLADLRERL GRIVVGWTKA GEPVTAEDLK
AAGAMAVLLR DALKPNLLQT LEGTPALIHT GPFGNIATGN SSVVADRIGS RAGDFLVTEA
GFAADMGAER FFNVKCRAAG LTPDAAVVVV TVRALKAHSD RFQVKLGKEL PAEMLAEGPA
DVEAGAPNLR KHLSIIRSFG VQPVVAINAF PTDHDSEHEV IRRIATEEGA RVAVSTHVAE
GGQGARELAR VVAEACEEET SFTPTYELSD PLATKIEKIA TGVYGADGVS FEPAARRALE
QYTERGYGEL PVLIAKTQMS LSHDPNLKGA PTGWTLPIRE VRLAAGAGYV YALAGSIMTM
PGLSKHPGAE RIDLDEQGNV VGLF