| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ksed_12780 |
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| Symbol | |
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| ID | 8372786 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Kytococcus sedentarius DSM 20547 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013169 |
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| Strand | + |
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| Start bp | 1320020 |
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| End bp | 1321528 |
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| Gene Length | 1509 bp |
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| Protein Length | 502 aa |
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| Translation table | 11 |
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| GC content | 77% |
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| IMG OID | 644991555 |
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| Product | tRNA/rRNA cytosine-C5-methylase |
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| Protein accession | YP_003149075 |
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| Protein GI | 256825115 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases |
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| TIGRFAM ID | [TIGR00563] ribosomal RNA small subunit methyltransferase RsmB |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.0499293 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0153093 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCTGAGG CCAGGGACAC GCAGGATGCA CGCAACGACC GGCGCGGCCG CAGCGCCCAG
GCGCCACGGC AGCGCGCCCG CCGGGCCGAT GCCGCCCGGA CGGCGGCCTG GCACCTGCTG
GCCGCCGTCG ACGAGGGCGC GTACGCCAAC CTCGAGCTGC CGCACGTCCT GCGTCGCTTC
CGTTTGGCCG GCCGGGACGC GGCCTTCGCC ACCGAGCTGG CGTTCGGGAC GGTCCGGCAG
CAGGGCCTGT ACGACCTGGT GATCGCGCGG GCCACTGGGC GCGCGGTGGA CACACTCGAC
CCCGAGCTGA TGCGCACGCT CCGGCTCGGG GCGCACCAGG CGCTCTCGAT GCGGGTGCCG
CCCCACGCGG CCGCCGACCA GACCGTCGCG CTGGCCCGGT GGGTCAACGG GGCCGGTCCC
GCCAAGCTCG TGAACGCGGC CATGCACCGC ATGACGGAGA AGGACCGAGA GACCTGGGTG
GCCGAGGTCA CCGAGGGCCT GCAGGGCCCG GACCTGCTCG CGGCGCGGCA CTCGCACCCC
ACCTGGGTGG TGCGCGCCCT GATGGCGGGC CTGGTGGACC GTGGTCGCCC GGTGGAGGAG
ATCGACGAGC TGCTGGCCGC GCACAACACC CCGGCGTTGG TGTCCCTGGT GGCCCGGCCC
GGGTGGGTGG AGGTGTCCGA GCTGCTGGAG CACCCCGCGG TCGAGGAGGG GCGCTGGGCG
CCGACGGCGG CCACCCTGTC CGAGGGCGCC CCGGCGGCCG TGTCGGCCGT CGAGCAGGGC
CGCGCCGGTG TCCAGGACGA GGGCTCCCAG CTGGCCGCCC TCGCGCTGGC CGGAGCGCCC
ACGCGCGGGC AGGACTCCGG GCTCTGGCTG GACCTGTGTG CCGGCCCCGG GGGCAAGGCC
GCCCTGCTGG CCGCGACGGC CCACGAGCGG GGTGCCCGCA TCGTGGCGAA CGAGCTGCAC
CCCCACCGGG CCGAGCTCGT GCGCGGCACC CTCAACCCTG GTGGCCTGCC GGACGGCGCC
GCGCCGCAGG CGGAGGTCAC GGTGGGCGAC GGTGCGGACC TCGCCGCAGA GCGGCCGGAC
GCCTTCGACC GGGTCCTGGT CGACGTGCCG TGCACCGGGT TGGGGGCCCT ACGGCGCCGC
CCGGAGGCCC GCTGGCGCCG GCAGCCCGCC GACCTGGCCT CGCTGGCGCC CACCCAGCGT
TCGCTCCTGC ACGCCGCGCT CGATGCGGTG CGCCCCGGGG GTGTCATGGC CTACGTGACC
TGCTCGCCGC ACCCGGCCGA GACCTCGGTG GTGGTCGATG ACGTGCGCGC CCGCCGCGAC
GACGTCGAGC TGCTCGAGGT CGCGCCCGTC CTGCGCGAGG TGGCCCCGGC CACCTCGGCC
GCGGACCTGG AGCCTCTCGA GGGAGCCCGC GGCGCGCGGG CCACGTCCGT GCAGCTGTGG
CCGCACGTCC ACGGCACCGA CGCCATGTAC ATCGCCCTGC TGCGACGCAC CCCCCAGGAG
GACGCATGA
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| Protein sequence | MAEARDTQDA RNDRRGRSAQ APRQRARRAD AARTAAWHLL AAVDEGAYAN LELPHVLRRF
RLAGRDAAFA TELAFGTVRQ QGLYDLVIAR ATGRAVDTLD PELMRTLRLG AHQALSMRVP
PHAAADQTVA LARWVNGAGP AKLVNAAMHR MTEKDRETWV AEVTEGLQGP DLLAARHSHP
TWVVRALMAG LVDRGRPVEE IDELLAAHNT PALVSLVARP GWVEVSELLE HPAVEEGRWA
PTAATLSEGA PAAVSAVEQG RAGVQDEGSQ LAALALAGAP TRGQDSGLWL DLCAGPGGKA
ALLAATAHER GARIVANELH PHRAELVRGT LNPGGLPDGA APQAEVTVGD GADLAAERPD
AFDRVLVDVP CTGLGALRRR PEARWRRQPA DLASLAPTQR SLLHAALDAV RPGGVMAYVT
CSPHPAETSV VVDDVRARRD DVELLEVAPV LREVAPATSA ADLEPLEGAR GARATSVQLW
PHVHGTDAMY IALLRRTPQE DA
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