Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ksed_12060 |
Symbol | aceE |
ID | 8372714 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Kytococcus sedentarius DSM 20547 |
Kingdom | Bacteria |
Replicon accession | NC_013169 |
Strand | - |
Start bp | 1231175 |
End bp | 1233922 |
Gene Length | 2748 bp |
Protein Length | 915 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644991484 |
Product | pyruvate dehydrogenase subunit E1 |
Protein accession | YP_003149008 |
Protein GI | 256825048 |
COG category | [C] Energy production and conversion |
COG ID | [COG2609] Pyruvate dehydrogenase complex, dehydrogenase (E1) component |
TIGRFAM ID | [TIGR00759] pyruvate dehydrogenase E1 component, homodimeric type |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.00682926 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.280194 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGTCGACCA AGGATTCCGG ACCGATTCTC AACGGTCTGC CCAGCCAGCT CCCGGACATC GACCCCGAGG AGACCGGTGA GTGGTTGGAC TCGCTGGACG GGCTCGTCGA GGAGCGGGGG CGCGCCCGCG CGCGCTACGT GATGCTGGAG CTGCTCAACC GCTCGCGGGA GCAGCAGGTT GGCGTCCCCT CGCTGACCAC CACCGACTAC ATCAACACCA TCGGCCCCGA GGCGGAGGCC TGGTTCCCCG GTGACGAGGA GGTGGAGCGC CGCTACCGCG CCTGGATCCG GTGGAACGCC GCGATCATGG TGCACCGCGC CCAGCGCCCG GAGATCTCCG TCGGCGGGCA CCTCTCGAGC TACGCCTCGG CCGCCACCCT CTACGAGGTG GGCTTCAACC ACTTCTTCCG CGGCCGCCAG CACCCCGGCG GCGGCGACCA GGTCTTCTTC CAGGGCCACG CCTCCCCCGG CATCTACGCC CGCTCCTTCC TGGAGGGCCG CCTCACCGAG GACCAGCTCA ACGGTTTCCG GCAGGAGAAG TCCCACTACG TGGACGGCAA GCTCATTGCG CTGCCGAGCT ACCCGCACCC GCGGAGCATG CCGGACTTCT GGCAGTTCCC GACCGTCTCG ATGGGGCTGG GCCCGCTGGG CGCGATCGCG CAGGCCCAGT TCAACAAGTA CCTGCACAAC CGCGGCCTGA AGGACACCAG CGACCAGCAC GTGTGGGCCT TCCTCGGTGA CGGCGAGATG GACGAGCCAG AGTCCCGCGG CGCGCTGCAG ATCGCGGCGA ACGAGGGCCT GGACAACCTG ACCTTCGTGG TGAACTGCAA CCTGCAGCGT CTGGACGGTC CGGTGCGCGG CAACGGCAAG ATCGTGCAGG AGCTCGAGGC CTTCTTCCGT GGCGCAGGGT GGAACGTCAT CAAGGTGCTC TGGGGCCGTG GCTGGGACGA CCTGCTGGCC GCGGACCGCG ACGGCGCGCT GGTCAACCTC ATGAACTCCA CGCCCGACGG GGACTTCCAG ACCTTCCGTG CCAACGACGG CGCCTACGTG CGCGAGCACT TCTTCGAGCG CGACCCGCGG ACCGCCAAGA TGGTCAAGGA CTGGTCCGAC GAGGACATCT GGTGGAAGCT CAAGCGCGGC GGTCACGACT ACCGCAAGGT CTTCAGCGCC TACCAGGCGG CCATGAACCA CTCCGGCCAG CCGACGGTGA TCCTCGCCCA CACCATCAAG GGCTACTCGC TCGGCTCGCA CTTCGCCGGG CGCAATGCCA CGCACCAGAT GAAGAAGCTG ACCGTGGAGG ACCTGAAGGG CTTCCGCGAC AGCCTGCAGA TCCCGGTGCC GGACTCAGCC TTCGAGGACG ATCAGTTCGC CGCGCCGTAC TACCACCCCG GCGAGGACGA CGAGACGATC CAGTACATGC TGGACCGCCG CAAGAAGCTG GGTGGGGACC TGCCGGCCCG CCTCTCCGAG CACGTGCCGC TGACCCTGCC GCCGGAGAAG ACCTACGAGA TCGGCCGCAA GGGGTCGGGC ACGCAGGCCG TGGCCACCAC GATGGCCTTC GTCCGCATCC TCAAGGACAT GATGCGGGAT TCCGAGATCG GCAAGCGGAT CGTGCCGATC ATCCCCGACG AGGCCCGCAC CTTCGGCATG GACGCCTTCT TCCCGACGGC CAAGATCTAC AACCCCCACG GGCAGAACTA CGAGTCGGTG GATGCCAACC TCATGCTGTC CTACAAGGAG AGCACCGAGG GGCAGATCCT CCACATGGGC ATCAACGAGG CCGGGTCGGT GGCTGCCTTC ACCGCCGCGG GGTCGTCCTA CGACACCCAC GACCTGCCGA TGATCCCGGT GTACGTCTTC TACTCGATGT TCGGCTTCCA GCGCACCGGC GACAGCATCT GGGCTGCCGC CGACCAGCTG GCGCGCGGCT TCCTCATCGG GGCGACGGCG GGCAAGACGA CGCTGGCGGG GGAGGGCCTG CAGCACATGG ACGGCCACAG CCCGCTGCTG GCCGCCTCCA ACCCGGCCGT CGTCTCCTAC GACCCGGCGT TCTCCTACGA GATCTCGCAC CTGATGGCCG AGGGCATGCG CCGCATGTAC GGCGAGGACG CCGAGAACGT CATCTTCTAC CTGACGGTCT ACAACGAGCC GATGGTGCAG CCCAAGGAGC CCGAGGACGT CGACGTCGAG GGCATCCTCA AGGGTGGCTA CCTGCTGGCC GAGGGCGAGG CCGAGGGACC GAAGGCGCGC CTGCTGGCCT CCGGCGTGGG TGTGCCCTGG GCGCTGGACG CCCAGCAGGA GCTCGCGGAG CGCTGGGGCG TGAACGCCTC GGTGTTCTCC ATCACCTCCT GGAGCGAGCT GGCCCGCGAG GCCACCCGCT GCGACGAGAA GGCCTTCCTG CACCCCGACG AGGAGCAGGA GACGCCGTAC GTGCAGCAGC TTCTGCCGGC CGGTGAGGGC CCGGTCGTGG CCACGAGCGA CTACATGCGC GCCGTGCCCG ACCTCATCGC CCCCTGGGTG CAGGACGACT ACTACGCCCT GGGCGCCGAC GGGTTCGGCT TCTCCGACAC CCGCCCGGCC GCCCGGCGGT ACCTGCACAT CGACTCCGCG TCGATGGTGG TCAAGACCCT CCAGCTCCTG GAGAAGCGAG GCGAGGTGGA GGCCGGCCGC GCCAAGGAGG CCGCCGAGCA CTACCGCCTG CTCGACACCA CGGCGGGCAC CTCGGGTGAG GCCGGCGGCG ACGCCTGA
|
Protein sequence | MSTKDSGPIL NGLPSQLPDI DPEETGEWLD SLDGLVEERG RARARYVMLE LLNRSREQQV GVPSLTTTDY INTIGPEAEA WFPGDEEVER RYRAWIRWNA AIMVHRAQRP EISVGGHLSS YASAATLYEV GFNHFFRGRQ HPGGGDQVFF QGHASPGIYA RSFLEGRLTE DQLNGFRQEK SHYVDGKLIA LPSYPHPRSM PDFWQFPTVS MGLGPLGAIA QAQFNKYLHN RGLKDTSDQH VWAFLGDGEM DEPESRGALQ IAANEGLDNL TFVVNCNLQR LDGPVRGNGK IVQELEAFFR GAGWNVIKVL WGRGWDDLLA ADRDGALVNL MNSTPDGDFQ TFRANDGAYV REHFFERDPR TAKMVKDWSD EDIWWKLKRG GHDYRKVFSA YQAAMNHSGQ PTVILAHTIK GYSLGSHFAG RNATHQMKKL TVEDLKGFRD SLQIPVPDSA FEDDQFAAPY YHPGEDDETI QYMLDRRKKL GGDLPARLSE HVPLTLPPEK TYEIGRKGSG TQAVATTMAF VRILKDMMRD SEIGKRIVPI IPDEARTFGM DAFFPTAKIY NPHGQNYESV DANLMLSYKE STEGQILHMG INEAGSVAAF TAAGSSYDTH DLPMIPVYVF YSMFGFQRTG DSIWAAADQL ARGFLIGATA GKTTLAGEGL QHMDGHSPLL AASNPAVVSY DPAFSYEISH LMAEGMRRMY GEDAENVIFY LTVYNEPMVQ PKEPEDVDVE GILKGGYLLA EGEAEGPKAR LLASGVGVPW ALDAQQELAE RWGVNASVFS ITSWSELARE ATRCDEKAFL HPDEEQETPY VQQLLPAGEG PVVATSDYMR AVPDLIAPWV QDDYYALGAD GFGFSDTRPA ARRYLHIDSA SMVVKTLQLL EKRGEVEAGR AKEAAEHYRL LDTTAGTSGE AGGDA
|
| |