Gene Ksed_11830 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_11830 
Symbol 
ID8372691 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1208928 
End bp1209947 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content73% 
IMG OID644991461 
ProductABC-type metal ion transport system, periplasmic component/surface adhesin 
Protein accessionYP_003148987 
Protein GI256825027 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0803] ABC-type metal ion transport system, periplasmic component/surface adhesin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.00348761 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.825122 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCGTC ACTCACTCCG TCCCACCTCC CCCCTGTCGC GATGGGGGGC CGGCGCCCTC 
GCGGCGACCC TCGTGCTCGC GGGGTGCGGC GACGAGGCCG ACGGCGGGTC CGACGCCGGC
CAGGCGATGG CGGTCTCCAC CGGCCTCTTC CCGCTGACCC ACCTGGTGGA GAAGGTGGGA
GGCGACCACG TCGAGGTGAC CCAGGTGACT CCCTCGGGCA CCGATCCCCA CCACCTGGAG
ATGACCCCGA AGTCCACCGG GCAGCTGCAG GAGGCCGACC TCGTGGTGTA CCTGGAGACC
ATGCAGCCCG CACTGGACTC CGCCGTCGAC GCCGTGGCCG GTGACCACTC CTGGGACGTC
GCCGAGGCCG TGGACCTCGA GGCCGGCCCT CCGGAGGGTG AAGCCGAGGG CGAGGGCGAG
GAGCACGACC ACGCCGAGGA CGAGGGTGAG GGCCACGACG ACCACGCGGA CCACGGGCAC
GAGGGCCACG ACCACGGCGG GGTGGACCCG CACTTCTGGC TGGACCCCCT CACCTACGCG
AAGGCGGCCC GGGCGACCGG GGAGCGGCTC GCCGAGCAGG ACCCGGACCA CGCGGACGAC
TACCGCCGCA ACGCCGAGGC CTACGCCGAG GAGCTCGAGG CGCTCGATGA CGAGCTCGCG
AAGGGTTTTG CCTCCTGCGA GATCACCGAC CTGGTGGTGG GGCACGAGGC CTACGCCTGG
TTCAGCGGGC GGTACGGCTT CCACCAGATG GGGGTGGCCG GGATCGCCAA CGGGGCAGAG
GTCTCCCCCG CTCGGCTGGC GGAGCTCACC GGGGTGGTGC GGGAGGCCGG GGTGACCACC
ATCTACGCCG AGCCCCTGAC CCCGCAGGAC AACGCCGAGG CACTGGCTGC CGAGACGGGG
ACGACGGTGG AGGTCCTCGA CCCGGTGGCC GGTCTGTCGG ACAGCTCGGC CGCCGAGGAC
TACGTGGGCC TGATGCGCGC GAACGCGGAG ACCCTGCGGG CCGGCCAGGA CTGCGCATGA
 
Protein sequence
MPRHSLRPTS PLSRWGAGAL AATLVLAGCG DEADGGSDAG QAMAVSTGLF PLTHLVEKVG 
GDHVEVTQVT PSGTDPHHLE MTPKSTGQLQ EADLVVYLET MQPALDSAVD AVAGDHSWDV
AEAVDLEAGP PEGEAEGEGE EHDHAEDEGE GHDDHADHGH EGHDHGGVDP HFWLDPLTYA
KAARATGERL AEQDPDHADD YRRNAEAYAE ELEALDDELA KGFASCEITD LVVGHEAYAW
FSGRYGFHQM GVAGIANGAE VSPARLAELT GVVREAGVTT IYAEPLTPQD NAEALAAETG
TTVEVLDPVA GLSDSSAAED YVGLMRANAE TLRAGQDCA