Gene Ksed_11180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_11180 
Symbol 
ID8372626 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1142058 
End bp1142873 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content75% 
IMG OID644991396 
Productmetalloendopeptidase-like membrane protein 
Protein accessionYP_003148923 
Protein GI256824963 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0739] Membrane proteins related to metalloendopeptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.00950153 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGCCACG GTCGGGTCAT GGCACCCCTC GAGCACCCCC TCCTGACCCG TTCCCGGGCC 
CTCCGCCGCC TCGGCGCCGC GATGACGGCC GCGATCCTCC TGGTCACCGG GACCCCTGAC
CCCGTCCCGG CGAGCGACCC GACCCCGGCG ACCGAGCCAC GCGTGAGCGG GACCGACCCC
CACGTGGACG CCGGGGCCAG CACACAGCTC CCTCCCCCGG CCTGGCTGCC CTGGCAACAC
CGCGTCCAGC TCGACGTCGT CACCCGGCAC GCGGCCCACA CGTGGGGCCT CGCAGCCGCC
GTGGGTCAGG CCCCCGGCTC CCCGGCGGCG CCGGGGACGG CCGACGGCGC GGCCCCCCGC
GGGTCGATGC CGAGCAGCTC CACCGCAGCC CTCAACCCGC TGGACTACAA GTGGCCGATG
TGGCCGGTGA AGCTCCGCCG TGCCTTCAAC CCGCCCAAGA AGGCATGGGG CCGGGGACAC
CGCGGGGTGG ACCTCGAGGG CGTGCCCGGC CAACCGGTGT TCGCCGCCGG GCCGGGATTC
ATCTCCTGGA GCGGGACGAT CAACTCGGTG GGTTCCCTGT CCGTGACGCA CACGCCGCGG
CTGCGCACCA CCTACCTGCC GCTGACCGGG CGCTTGCCGA TGGGCACACC GGTGATCGCC
GGCACCCCCG TCGGGCTGCT GGCCCCGGGG CACTGCCTCC CGGCCTGCTT GCACTGGGGG
GCGAAGGTGT CCGCGCGGAA GTACGTCGAC CCCACCCTCC TCCCCGACTT CGCACCGGAG
CTCAAGCCCC GGGACGAACG CCGCCGGCGG CGCTGA
 
Protein sequence
MGHGRVMAPL EHPLLTRSRA LRRLGAAMTA AILLVTGTPD PVPASDPTPA TEPRVSGTDP 
HVDAGASTQL PPPAWLPWQH RVQLDVVTRH AAHTWGLAAA VGQAPGSPAA PGTADGAAPR
GSMPSSSTAA LNPLDYKWPM WPVKLRRAFN PPKKAWGRGH RGVDLEGVPG QPVFAAGPGF
ISWSGTINSV GSLSVTHTPR LRTTYLPLTG RLPMGTPVIA GTPVGLLAPG HCLPACLHWG
AKVSARKYVD PTLLPDFAPE LKPRDERRRR R