Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ksed_11180 |
Symbol | |
ID | 8372626 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Kytococcus sedentarius DSM 20547 |
Kingdom | Bacteria |
Replicon accession | NC_013169 |
Strand | - |
Start bp | 1142058 |
End bp | 1142873 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 644991396 |
Product | metalloendopeptidase-like membrane protein |
Protein accession | YP_003148923 |
Protein GI | 256824963 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.00950153 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGGCCACG GTCGGGTCAT GGCACCCCTC GAGCACCCCC TCCTGACCCG TTCCCGGGCC CTCCGCCGCC TCGGCGCCGC GATGACGGCC GCGATCCTCC TGGTCACCGG GACCCCTGAC CCCGTCCCGG CGAGCGACCC GACCCCGGCG ACCGAGCCAC GCGTGAGCGG GACCGACCCC CACGTGGACG CCGGGGCCAG CACACAGCTC CCTCCCCCGG CCTGGCTGCC CTGGCAACAC CGCGTCCAGC TCGACGTCGT CACCCGGCAC GCGGCCCACA CGTGGGGCCT CGCAGCCGCC GTGGGTCAGG CCCCCGGCTC CCCGGCGGCG CCGGGGACGG CCGACGGCGC GGCCCCCCGC GGGTCGATGC CGAGCAGCTC CACCGCAGCC CTCAACCCGC TGGACTACAA GTGGCCGATG TGGCCGGTGA AGCTCCGCCG TGCCTTCAAC CCGCCCAAGA AGGCATGGGG CCGGGGACAC CGCGGGGTGG ACCTCGAGGG CGTGCCCGGC CAACCGGTGT TCGCCGCCGG GCCGGGATTC ATCTCCTGGA GCGGGACGAT CAACTCGGTG GGTTCCCTGT CCGTGACGCA CACGCCGCGG CTGCGCACCA CCTACCTGCC GCTGACCGGG CGCTTGCCGA TGGGCACACC GGTGATCGCC GGCACCCCCG TCGGGCTGCT GGCCCCGGGG CACTGCCTCC CGGCCTGCTT GCACTGGGGG GCGAAGGTGT CCGCGCGGAA GTACGTCGAC CCCACCCTCC TCCCCGACTT CGCACCGGAG CTCAAGCCCC GGGACGAACG CCGCCGGCGG CGCTGA
|
Protein sequence | MGHGRVMAPL EHPLLTRSRA LRRLGAAMTA AILLVTGTPD PVPASDPTPA TEPRVSGTDP HVDAGASTQL PPPAWLPWQH RVQLDVVTRH AAHTWGLAAA VGQAPGSPAA PGTADGAAPR GSMPSSSTAA LNPLDYKWPM WPVKLRRAFN PPKKAWGRGH RGVDLEGVPG QPVFAAGPGF ISWSGTINSV GSLSVTHTPR LRTTYLPLTG RLPMGTPVIA GTPVGLLAPG HCLPACLHWG AKVSARKYVD PTLLPDFAPE LKPRDERRRR R
|
| |