Gene Ksed_10630 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_10630 
Symbol 
ID8372571 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1086378 
End bp1087616 
Gene Length1239 bp 
Protein Length412 aa 
Translation table11 
GC content73% 
IMG OID644991343 
Productfumarylacetoacetate hydrolase 
Protein accessionYP_003148872 
Protein GI256824912 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) 
TIGRFAM ID[TIGR01266] fumarylacetoacetase 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.0499579 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.76587 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGCCT GGCCCGACCT GCCCGCCGAC CACCCCTTCG GCCCGAAGAA CCTGCCCTAC 
GGGGCGTTCC TGACCGAGGA CGCCCCCAGC GCGCGCCTGG GCGTCCGCAT CGGCGACCAG
GTGCTCGACC TGGCCGGCGC GGTCCGTGCG CAGGGCCTCG ACGACGGCAC CGTGTGGGCC
GCTGCCCTGC TCGAACCCAC CCTCAACCGT CTCCTCGAGC TCGGCCACAC GGCGTGGGCC
GGCGCCCGCT CCTGGGTCAC CGGCCTCTTC GCGGACCCCG CGCAGGCCGA TGCGGTGCGC
CCCCACCTCA TCGACCTGGA CCGGGTGGAG CTCGTGCTGC CCTTCCGCCC GGCGGACTAC
GTGGACTTCT ACGCCTCGGA GCACCACGCC ACGAACGTCG GCTCGATCTT CCGCCCGGAC
CAGGCGGCGC TGACGCCGAA CTGGAAGCAC CTGCCGATCG GCTACCACGG CCGCAGCTCC
ACCCTCGTGG TCTCGGGCAC GGACATCGTG CGCCCGCAGG GGCAGCGCAA GCCCAAGGAT
GCGGATGCGC CGACCTTCGG CCCCAGCCAG CGGCTCGACA TCGAGGCCGA GCTCGGCTTC
CTCGTCGGCG GGCCGACGGC GGTGGGCTCG CGCGTGTCCG TGGACGATGC CGCGCAGCAC
CTCTTCGGCG CGATGCTGTT CAACGACTGG TCGGCCCGGG ACATCCAGGC CTGGGAGTAC
GTGCCCCTGG GCCCCTTCCT GGGCAAGTCC TTCGCCTCCT CGGTCGGTGC TTGGGTCGTG
CCGATGGACG CCCTGGCCGC GGCCCGCACC GAGCTGCCGG CCCAGGACCC GCAGCCGCTG
GAGTACCTGC GGGGCGACGG GTCCGGGCTG TTCGGGCTGG ACATCCAGAT GGAGGTCCGG
CTCAACGGCA CCGTGGTGGC ACGCCCGCCG TACGCCGAGA TGTACTGGTC GCCGGCGCAG
ATGCTGGCCC ACATGACCGT CAACGGCGCC GCCCTGTCCG CCGCGGACGT GTTCGCCTCC
GGCACGGTCT CCGGTGACGA CAAGGACAAG CGCGGCTCCT TCCTCGAGCT GTCCTGGAGC
GGCCAGGAGC CGATCGTCCT GGAGGACGGC AGCGAGCGGA GCTTCCTGGA GGACGGCGAC
ACGGTCACCA TCACCGGCTG GGCACCGGGG CCGGACGGCT CCCGCATCGG CCTCGGTGAG
GTGACCGGGA CGATCCTCCC GGCCACCCCC CTCGGCTGA
 
Protein sequence
MIAWPDLPAD HPFGPKNLPY GAFLTEDAPS ARLGVRIGDQ VLDLAGAVRA QGLDDGTVWA 
AALLEPTLNR LLELGHTAWA GARSWVTGLF ADPAQADAVR PHLIDLDRVE LVLPFRPADY
VDFYASEHHA TNVGSIFRPD QAALTPNWKH LPIGYHGRSS TLVVSGTDIV RPQGQRKPKD
ADAPTFGPSQ RLDIEAELGF LVGGPTAVGS RVSVDDAAQH LFGAMLFNDW SARDIQAWEY
VPLGPFLGKS FASSVGAWVV PMDALAAART ELPAQDPQPL EYLRGDGSGL FGLDIQMEVR
LNGTVVARPP YAEMYWSPAQ MLAHMTVNGA ALSAADVFAS GTVSGDDKDK RGSFLELSWS
GQEPIVLEDG SERSFLEDGD TVTITGWAPG PDGSRIGLGE VTGTILPATP LG