Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ksed_10330 |
Symbol | |
ID | 8372542 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Kytococcus sedentarius DSM 20547 |
Kingdom | Bacteria |
Replicon accession | NC_013169 |
Strand | + |
Start bp | 1057606 |
End bp | 1058466 |
Gene Length | 861 bp |
Protein Length | 286 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 644991314 |
Product | Flp pilus assembly protein TadB |
Protein accession | YP_003148843 |
Protein GI | 256824883 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4965] Flp pilus assembly protein TadB |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.00309565 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCATGC TGCTGGGCGC CACCCTCGGG CTCGGCCTGG CGCTGGTCTG GGACTCGTTC TGGCCCCGGC GCCCACGCGC ACGCGTCACG CGGACGACCT GGCAGGACCG GGTGTCCGAC GACCTCGCGG TGGCGCGCTG GTCCGGTGTC ACCCCGGGTG GCCTGGTGCT GGCGACGGCG GCACTGGGAG TCGTGACCTT CGTGCTGACC GCTGGCCTCA CCGGCGTGCT GCCCGTGGCG GCCGCCTTCG GCCTGATCGC CTCCGGCCTG CCGTGGGCGG TGCTCTCCGG CACCTCGCGG CGCCGCCGCA GCCGGCTGCG CGACGCGTGG CCGGACTGCG TGGACCACGT CGCCTCCGGC GTGCGGGCGG GTATGGCCCT GCCGGAGGCG CTCGCCCAGC TCGCGGTCCG CGGCCCCGAG GAGCTGCGGC CGGCCTTCGC CGGCTTCGCC CACGACTACC GGGCCACCGG GCGCTTCCAC GTCTCCCTGG ACGCCCTCAA GGAACGCCTC TCCGACCCGG TCGCGGACCG GCTGGTGGAG TCCCTCCGCA TCGCCCGCGA GGTCGGCGGC AGCGACCTGG GTGTCGTGCT GCGGACCCTC AGCTCGTTCC TGCGCGAGGA GGCCCACACC CGCTCGGAGA TGGAGGCCCG CCAGAGCTGG ACCGTCAACG CGGCCCGGCT GGGCCTGGCC GCGCCGTGGA TCGTGCTGGC GATGCTGGCC ACCCGCGGTG ACTCACTGGC CGCCTACAAC TCGACCACCG GGGCCCTGGT GCTGGTCTTG GGGGGCCTGG TCTCCGTGGG CGCCTACCTC CTCATGATGC GGCTGGGCCG CATCCCCCAG GCAGAGCGGG TGCTGCGATG A
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Protein sequence | MGMLLGATLG LGLALVWDSF WPRRPRARVT RTTWQDRVSD DLAVARWSGV TPGGLVLATA ALGVVTFVLT AGLTGVLPVA AAFGLIASGL PWAVLSGTSR RRRSRLRDAW PDCVDHVASG VRAGMALPEA LAQLAVRGPE ELRPAFAGFA HDYRATGRFH VSLDALKERL SDPVADRLVE SLRIAREVGG SDLGVVLRTL SSFLREEAHT RSEMEARQSW TVNAARLGLA APWIVLAMLA TRGDSLAAYN STTGALVLVL GGLVSVGAYL LMMRLGRIPQ AERVLR
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