Gene Ksed_08130 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_08130 
Symbol 
ID8372322 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp826311 
End bp827120 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content73% 
IMG OID644991097 
Productdeoxyribose-phosphate aldolase 
Protein accessionYP_003148632 
Protein GI256824672 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0274] Deoxyribose-phosphate aldolase 
TIGRFAM ID[TIGR00126] deoxyribose-phosphate aldolase 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.426223 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGCAC GCTTCGCACC CGGTACCGAG CTCACCCTGC AGCAGGTCGC CGACCTGTTC 
GACCACGCCC TGCTCAAGCC CGAGCTGACC ACCGACGACG TGCGCTCCGG CGTCGCCGAG
GTGGCGGCCC TCAACGCGTT CAGCGTGTGC GTGCGCCCCA GCGACATCAC CCTGGCCGTC
GAGGCGATCG CGGCCACCAC CGCGCAGGGG GCCGGCGAGG GCGACGGACA GCCCAGCCGC
ACCACCGTGT GCACCGTCAT CGGTTTCCCC CACGGCACCA CCTCCACGGC GGCCAAGGTC
GCCGAGGCCG AGCAGGCCGT GGCCGACGGC GCCACCGAGC TGGACATGGT GCTCAACATC
GGTCGCCTGC GCAGCGGCCA GGTCGATGCG GTGCGTGAGG ACATCGCGGC CGTCGTCGAG
GCCGGGCACG CCCACGACGT GCCGGTGAAG GTGATCTTCG AGACCGCTCT GCTGGACGAC
GCGCAGAAGG AGGCTGCCTG CCGCGCCAGC GCGGAGGCCG GCGCGGACTT CGTGAAGACC
TCCACCGGGT TCGCCGGTGG TGGCGCGACG CTCCCCGACG TGCGCCTGAT GCGCGCGAAC
TCCCCTGAGA CGGTCCAGGT GAAGGCCTCC GGCGGCGTGC GCGACGTGGA CACCCTGCTG
GCGATGCTGG CCGAGGGCGT CACCCGCATC GGCACCAGCT CGACCTCCGC CCTGCTGGCC
GAGGCCCGCG AGCGCTTGGC CGCCGGCACC CTGGTCGTGC CCGAGCCCGC GGACACCCTG
GACACCCCGG AGCGCGACTC GCTCTACTGA
 
Protein sequence
MTARFAPGTE LTLQQVADLF DHALLKPELT TDDVRSGVAE VAALNAFSVC VRPSDITLAV 
EAIAATTAQG AGEGDGQPSR TTVCTVIGFP HGTTSTAAKV AEAEQAVADG ATELDMVLNI
GRLRSGQVDA VREDIAAVVE AGHAHDVPVK VIFETALLDD AQKEAACRAS AEAGADFVKT
STGFAGGGAT LPDVRLMRAN SPETVQVKAS GGVRDVDTLL AMLAEGVTRI GTSSTSALLA
EARERLAAGT LVVPEPADTL DTPERDSLY