| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ksed_08120 |
|---|
| Symbol | |
|---|
| ID | 8372321 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Kytococcus sedentarius DSM 20547 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013169 |
|---|
| Strand | + |
|---|
| Start bp | 824940 |
|---|
| End bp | 826241 |
|---|
| Gene Length | 1302 bp |
|---|
| Protein Length | 433 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 644991096 |
|---|
| Product | thymidine phosphorylase |
|---|
| Protein accession | YP_003148631 |
|---|
| Protein GI | 256824671 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0213] Thymidine phosphorylase |
|---|
| TIGRFAM ID | [TIGR02644] pyrimidine-nucleoside phosphorylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 0.80887 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.487259 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGGAA CGCAGCACGA CGCCGTGGAC ATCATCCGCA CCAAGCGCGA CGGAGAGCGC
CTCTCCGACG AGCAGATCGA CTGGGTGATC GACGCCTACA CCCGGGGGGA CGTCGCCGAC
GAGCAGATGT CGGCCCTGGC CATGGCCATC TACCTCAACG GCATGGAGCC CGACGAGATC
TCCCGCTGGA CCTCCGCCAT GATCGCATCG GGGGAGCGGA TGGACTTCTC CACCCTGTCG
CGCCCCACCG CGGACAAGCA CTCGACCGGG GGTGTTGGCG ACAAGATCAC CCTCCCGCTG
GCCCCCCTGG TGGCGGCCTG CGGGGTCGCG GTCCCGCAGC TCTCCGGACG CGGGCTGGGC
CACACCGGCG GCACCCTGGA CAAGCTCGAG GCCATCCCCG GCTGGCAGGC CGACCTGACC
AACGAGGCGA TGATGCAGCA GCTCGAGGAG GTCGGGGCCG TCATCTGTGC CGCGGGCGCC
GGGCTGGCCC CCGCGGACAA GAAGCTCTAC GCCCTGCGCG ACGTGACCGG CACGGTCGAG
GCGCTGCCCC TCATCGCCAG CTCGATCATG TCCAAGAAGA TCGCCGAGGG CACCGGCGCG
CTGGTGCTCG ACGTGAAGGT GGGCTCCGGC GCGTTCATGA AGACCGAGGC AGACGCCCGG
GCCCTGGCCG AGCGTATGGT GGCCCTGGGC GATGCCGCCG GTGTCACCAC CGTCGCGCTG
CTCACCGACA TGTCTGCCCC GCTGGGCCGG ACGGCGGGCA ACGGCCTCGA GGTCATCGAG
TCCGTCGAGG TCCTCTCCGG CGGGGGACCG GCGGACGTGC GCGAGCTGAC GATCGCCCTG
GCCCGCGAGA TGGTGCTGGC CTCCGGCATC GAGGGGGCCG ATGCGGTGGA CGTCGCCGAG
GTGCTGGACT CCGGCAAGGC GCTTCAGGTG TGGAAGCAGA TGATCGCCGC CCAGGGTGGG
GACCCCGAGG CCGAGCTGGC TCTGGGGGAG CACACCGCCG AGGTCACGGC CGAGGCCGGT
GGCGTCATCA CGGAGATGGA CGCCTACAAG GTGGGTGTCG CCGCGTGGCG CCTGGGTGCG
GGCCGTGCCC GCAAGGAGGA CCCGGTGCAG GCCGGTGCCG GGGTGCGCTG GCACGCGGGC
GTCGGGGAGC GCGTGGAGGC CGGGCAGGTG CTGTTCACCT GCTACACCGA GACGTCGGAG
CGCCTGCAGC GCGGGGTGGA GACCCTCGCC GGCGCGGTGA CGATCGACAC CGGCGCCGAG
CCCTTCGAGC GCACACTGGT GATCGACCGC ATCACGGCCT GA
|
|---|
| Protein sequence | MTGTQHDAVD IIRTKRDGER LSDEQIDWVI DAYTRGDVAD EQMSALAMAI YLNGMEPDEI
SRWTSAMIAS GERMDFSTLS RPTADKHSTG GVGDKITLPL APLVAACGVA VPQLSGRGLG
HTGGTLDKLE AIPGWQADLT NEAMMQQLEE VGAVICAAGA GLAPADKKLY ALRDVTGTVE
ALPLIASSIM SKKIAEGTGA LVLDVKVGSG AFMKTEADAR ALAERMVALG DAAGVTTVAL
LTDMSAPLGR TAGNGLEVIE SVEVLSGGGP ADVRELTIAL AREMVLASGI EGADAVDVAE
VLDSGKALQV WKQMIAAQGG DPEAELALGE HTAEVTAEAG GVITEMDAYK VGVAAWRLGA
GRARKEDPVQ AGAGVRWHAG VGERVEAGQV LFTCYTETSE RLQRGVETLA GAVTIDTGAE
PFERTLVIDR ITA
|
|---|
| |