Gene Ksed_07170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_07170 
Symbol 
ID8372226 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp717127 
End bp717897 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content72% 
IMG OID644991003 
ProductABC-type multidrug transport system, ATPase component 
Protein accessionYP_003148541 
Protein GI256824581 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value0.143642 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTCCA TGACGTGTGC GATGGAGTGG CGGGGGCTCA CCAAGGCCTT CGGGGGACAG 
GTGGCGGTCG ATGGGGTGAC CCTCGCCGTG CCCCGTGGTG CGGTGCTCGG GCTGGTGGGG
CCCAATGGCG CAGGCAAGAC CACCGCCCTG TCGATGGCGA CGGGTCTGCT CGCCCCGGAC
GCGGGCACCG TGGAGGTGCT GGGGCACGAC GTGTGGAGCG ACCCGCGGGG GGCCAAGGCG
CTGCTGGGGG TGCTGCCGGA CGGCATGCGC GTCTTCGACC GCCTCTCGGG GCGGGAGCTG
CTCACCTACA CCGGGCGCCT GCGCGGCATG GACGAGGCGG TCATCGCCGA GCGCAGCGCG
GAGCTGCTGC AGGCCCTGGG GCTCGAGGGG GCCGGCAACA AGATGGTGGT GGACTACTCC
GCCGGCATGA CCAAGAAGAT CGGGCTGGCC TGTGCCCTCA TCCACGCGCC CAGGCTGCTG
GTGCTGGACG AGCCGCTGGA GGCGGTGGAC CCCGTCTCTG CGCAGGGCAT CCGGGAGCTG
CTGGCCGGGT ACGCGGCCAA CGGGGGCACG GTGGTCATCT CCAGCCACGT CATGGAGCTG
GTGGAGTCCC TGTGCTCGCA CGTGGCGATC ATGCGTGAGG GGCAGATCCT GCGGGAGGGC
ACGGTGGAGG AGGTCCGCGA GGGTGACTCC CTGCAGAACA CGTTCATCCG CCTGGTGGGC
CGCGAGGCCG CGGGCGCGGG GGAGGGGTTG TCGTGGTTGC GCTCCTCCTG A
 
Protein sequence
MDSMTCAMEW RGLTKAFGGQ VAVDGVTLAV PRGAVLGLVG PNGAGKTTAL SMATGLLAPD 
AGTVEVLGHD VWSDPRGAKA LLGVLPDGMR VFDRLSGREL LTYTGRLRGM DEAVIAERSA
ELLQALGLEG AGNKMVVDYS AGMTKKIGLA CALIHAPRLL VLDEPLEAVD PVSAQGIREL
LAGYAANGGT VVISSHVMEL VESLCSHVAI MREGQILREG TVEEVREGDS LQNTFIRLVG
REAAGAGEGL SWLRSS