Gene Ksed_06450 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_06450 
Symbol 
ID8372154 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp640493 
End bp641215 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content65% 
IMG OID644990932 
Productdehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein 
Protein accessionYP_003148472 
Protein GI256824512 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones62 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACAG TCTTGATCAC CGGCGGGAAC CGCGGCTTGG GTCGCGCCGT CGCCGAGGAA 
CTTGTCGAGC GAGGTATGAC CGTCGTCGTA GGCGCTCGTC AAGCGAGCGA CGGTGTCGAG
GCCGCGCGCC AGATCGGAGG CGGGGCGACC TCCGTTCAGC TCGACGTGAC CGACCCAGCA
TCCATCGGTC AAGCAGCCGC CTGGATCCAG GAACACCACG GCCGACTGGA CGTTCTGATC
AACAACGCCG GTGTGCTTCC CGAAGCAACG AGCCAGTCGG CTGAGGCCGT GAACCTCGAC
CTGTTCCAGC AGACGTACGC CACCAATGTC TTCGGGCCCA TTGCGGTGCT GGAGACGTTC
CTTCCTGAAC TGCGGAAGTC CTCGCAGGGG CGGATCGTGA ACGTGTCGAC CACGATGGGA
TCGCTCGCCG ACCAGACCGA CCCGAGCTCG GCCTACTACG GCATGATCGT GCCCGCCTAC
CAGAGTTCGA AGGCGGCCCT CAACAACATC ACGATCGCAC TCGCCAAGGC GCTGGCCGAC
ACCTCGATCA AGGTCACCTC GGTTTGCCCA GGCTTCGTGC AGACCGACCT GACTCCCGTC
AACCGGGAGC AGGCACCGTT AACGGCGACA CAGGCCGCCG AAGTCGTCGT CGCCGCCGCC
ACCTTGCCCG ACGACGCGCC CTCGGGCACC TTCATCGACA GCAACGGCAC CGTTCCCTGG
TGA
 
Protein sequence
MTTVLITGGN RGLGRAVAEE LVERGMTVVV GARQASDGVE AARQIGGGAT SVQLDVTDPA 
SIGQAAAWIQ EHHGRLDVLI NNAGVLPEAT SQSAEAVNLD LFQQTYATNV FGPIAVLETF
LPELRKSSQG RIVNVSTTMG SLADQTDPSS AYYGMIVPAY QSSKAALNNI TIALAKALAD
TSIKVTSVCP GFVQTDLTPV NREQAPLTAT QAAEVVVAAA TLPDDAPSGT FIDSNGTVPW