| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ksed_04120 |
|---|
| Symbol | |
|---|
| ID | 8371922 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Kytococcus sedentarius DSM 20547 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013169 |
|---|
| Strand | - |
|---|
| Start bp | 398554 |
|---|
| End bp | 399534 |
|---|
| Gene Length | 981 bp |
|---|
| Protein Length | 326 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 644990708 |
|---|
| Product | putative NAD(P)H quinone oxidoreductase, PIG3 family |
|---|
| Protein accession | YP_003148252 |
|---|
| Protein GI | 256824292 |
|---|
| COG category | [C] Energy production and conversion
[R] General function prediction only |
|---|
| COG ID | [COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases |
|---|
| TIGRFAM ID | [TIGR02824] putative NAD(P)H quinone oxidoreductase, PIG3 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 48 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.0587726 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCGCGCCA TCGTGATCGA CAACTCCGGC GAGAAGCCGG TCCTGACCCT GTCCGAGGTC
GAGGACCCCA CCCCCGGCGA GGGCGAGGTC CTCGTGGAGG TGGCGGCCGC CGGCGTCAAC
CGGGCCGACC TCGTCCAGGC GTCCGGGAAG TACCCGCCGC CCCCCGGCGA GAGCGAGCTG
ATCGGCCTCG AGGTGAGTGG CCGCATCGCC GCCCTGGGCG CCGGCGACAC CGGTGACTGG
CAGGTGGGCG ACGAGGTGTG CGCCCTCCTG GCCGGCGGTG GGTACGCCGA GAAGGTGGCC
GTGTCGGCCG GACAGCTGCT GCCGGTGCCG GCGGGGGTGG ACCTGCAGAC GGCCGCCTCG
CTGCCCGAGG TCGCCTGCAC CGTGTGGTCC AACCTCGTCG ATGCGGGGCA CCTGGCCGCC
GGGGAGACCG TCCTGCTGCA CGGTGGTTCG TCGGGCATCG GCACCATGGG CATCCAGGTG
GCCAAGGCCC TGGGCGCCCG CGTCATCGTC ACCGCCGGGT CGCAGGAGAA GCTGCAGCGT
TGTGCCGAGT TGGGCGCCGA CGTCCTGGTG AACTACCAGG AGACCGACTT CCTCGAGGCG
GTCGGAGAGA ACACCGAGGA CGGGGTGGAC GTCATCCTCG ACCTCATCGG CGCCGACTAC
TTGGACCGCA ACCTGCAGGC GCTGGCGAAG GACGGGCGGC TGGTCATCAT CGGTCTCATG
GGCGGGCGCG AGGGCGAGAT CAACCTGGGC CTGATGCTGC AGCGCCGCCT GAGCGTGCAG
GCCACCGCGC TGCGGGGACG GGACCGAGCG GACAAGGCCC GGATCGTGGC GGCGGTGCGG
GAGAACGTCT GGCCCCGTGT GGAGTCCGGC GAGATCCGCC CCGTGGTGCA GGAGGTGCTG
CCGTGGGAGA AGGCGCAGGA GGCGCACCAG CTGCTCAAGG AGTCGCAGCA CGTGGGCAAG
GTGGTGCTGC GGGTGGGGTG A
|
|---|
| Protein sequence | MRAIVIDNSG EKPVLTLSEV EDPTPGEGEV LVEVAAAGVN RADLVQASGK YPPPPGESEL
IGLEVSGRIA ALGAGDTGDW QVGDEVCALL AGGGYAEKVA VSAGQLLPVP AGVDLQTAAS
LPEVACTVWS NLVDAGHLAA GETVLLHGGS SGIGTMGIQV AKALGARVIV TAGSQEKLQR
CAELGADVLV NYQETDFLEA VGENTEDGVD VILDLIGADY LDRNLQALAK DGRLVIIGLM
GGREGEINLG LMLQRRLSVQ ATALRGRDRA DKARIVAAVR ENVWPRVESG EIRPVVQEVL
PWEKAQEAHQ LLKESQHVGK VVLRVG
|
|---|
| |