Gene Ksed_04040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_04040 
Symbol 
ID8371914 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp390973 
End bp392178 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content78% 
IMG OID644990700 
Productsignal transduction histidine kinase 
Protein accessionYP_003148244 
Protein GI256824284 
COG category[T] Signal transduction mechanisms 
COG ID[COG4585] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value0.631107 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0622315 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCATGG ACCGCCTCGC CCGCCTGCTC GCCGGCGCCC TGTTGCTGTC CCTCTTGGCA 
CTGGCCACCT GGCGGTCCGG GGCCCAGGCC GGCGACGGGA GCAACCCCGA CCTGCCGGGG
TGGACCTTCC TGGTGGCCTC GTCCGTGTGG TGGCTCGCGT TCGCGGGCCT GCTGACCCCC
CGGCTGCGCA ACTCGACCCC CCGGCGGCCG TACACCGGCG CCGCGGTGTG GCTGGTGGCC
CTGAGCGTCG GGTGGGCCGC CCTGATGACC ACGCACGAGG CCTTCGCCTG GGTGGCCTTC
CCGCTCTTCC TGCTCTGGCT GATGCACCTG CCGCTGGTGG CAGCGGTGCC TGCCGTGCTC
GCGCTGACCG CGGTGGTGGG GGTGGTGGAG CTCGCCCAGG AGGACGGCCG ATGGGGTGGG
GTGCTGGGTC CCGCACTCGC GGCGGCCGCC TGCATCCTGG GCGCGTGGAC CATGACCCGG
CTGCGGCAGG AGTCCGAGGC GCGGGCGCGG TTGGTGGCCG AGCTGCGGTC CACCCGCCAG
GAGCTGGCCG CGGCCCACAC GGAGGCCGGC GCCCTGGCCG AGCGACACCG CATCGCCCGG
GACCTGCACG ACACGGTGGT GCAGTCGTTC ACGTCGGTGC TGCTGCTGGC CCGGGCCGGT
GGTCGGCCCG AGGAGGTGCT CCCCCGCATC GAGGAGGTGG CTGCCGACGG GCTGGCCGAG
TCGCGGCGGG TGGTGCAGAC GCTGCGGCGC GAGCCCGGCC GCACCTTGGC CGACGCGCTG
CGCCGCGCGG CGGCCGGCGT GGTGGACCCG CCCACCAGCT TTACCCTGAC CGGCACCCCG
CGGGAGCTGC CCACCGCCAC CGAGGTGGGG CTGCTGCGGA TCGCGCAGGG GGCCCTGGGC
AACGTGACCG AGCACGCCGG CGCCTCCCAG GCGTGGGTCG AGCTGGCCTT CACCCCCGAT
GCGGTGCGGC TGGAGGTCCG CGACGACGGC CGGGGCGGGG CACGGGTCGG CGCGGGCCCG
GAGGCTGCCG TCGCCCCCGT CGCCCCCGGG GCGGCCCCGG GGGCGGCCCC GGGGGCGGCC
CCGGGGGCGA ATCGGGGCAC GGGGCTGGCC GGCGCGCGCG ACCGCGCCGA GGACCTCGGC
GGCAGCTTCG CCCTGCGCTC GCCCGCCGGC CGGGGCACGC ACGTCGTCGT GGAGGTGCCG
GCGTGA
 
Protein sequence
MAMDRLARLL AGALLLSLLA LATWRSGAQA GDGSNPDLPG WTFLVASSVW WLAFAGLLTP 
RLRNSTPRRP YTGAAVWLVA LSVGWAALMT THEAFAWVAF PLFLLWLMHL PLVAAVPAVL
ALTAVVGVVE LAQEDGRWGG VLGPALAAAA CILGAWTMTR LRQESEARAR LVAELRSTRQ
ELAAAHTEAG ALAERHRIAR DLHDTVVQSF TSVLLLARAG GRPEEVLPRI EEVAADGLAE
SRRVVQTLRR EPGRTLADAL RRAAAGVVDP PTSFTLTGTP RELPTATEVG LLRIAQGALG
NVTEHAGASQ AWVELAFTPD AVRLEVRDDG RGGARVGAGP EAAVAPVAPG AAPGAAPGAA
PGANRGTGLA GARDRAEDLG GSFALRSPAG RGTHVVVEVP A