| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ksed_04020 |
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| Symbol | |
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| ID | 8371912 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Kytococcus sedentarius DSM 20547 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013169 |
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| Strand | - |
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| Start bp | 388272 |
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| End bp | 390101 |
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| Gene Length | 1830 bp |
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| Protein Length | 609 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644990698 |
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| Product | choline/carnitine/betaine transport |
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| Protein accession | YP_003148242 |
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| Protein GI | 256824282 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1292] Choline-glycine betaine transporter |
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| TIGRFAM ID | [TIGR00842] choline/carnitine/betaine transport |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.0187444 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.0477577 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCACAC ACACCGACCA CGATCGAGGC ACCCACATGT TGCAGAAACT GCACGACGCG
ATGGGTCTGC GGACCTCACC GACGATCTTC TTCGGCTCGT TCGCCGTCGC GATCGTCTTC
ATCGTCATCA CGTTGTCCTT CCCCGGGACG ATGGCCAACA CCTTCGAGTC CGGGTCGGAC
TGGCTGCTGG GCAACCTCGG CTGGTTCTAC ATCCTCGGCG TGACCGTCTT CCTGATCTAC
CTGATCGTCA CGGCCATGAG CCGTTTCGGA CGCATCCGGC TCTCCCCCCA CGACGAGGCG
CCCGACCACT CCTTCCCGGC GTGGTTCGCC ATGCTGTTCG CGGCGGGTAT CGGCACCATC
CTGATGTTCT GGGGTGTGGC CGAGCCGGTG AACCACTTCG CCAACCCGCC GATGGCGGAC
GTGGAGCCCG AGAGCGTGGA CGCCGCCCGC GAGGCCATGA GCTTCACGCT CTACCACTTC
GGGCTGCACA CCTGGACGAT CTTCGCCCTG CCGTCGCTGG CCTTCGCGTA CTTCATCTAC
CAGCGCAACC TGCCCCCGCG CGTGTCCTCC CTCTTCCACC CGCTGCTGGG TGACAAGGGC
ATCCACGGCC CCATCGGCAA GACCATCGAC ATCGTCGCGA TCGTCGGAAC GCTGTTCGGT
GTGGCCGTCT CCATCGCGCT GGGCACGCTG CAGATCAACG CCGGCCTGAG CGCCGTGCTG
GGCATCGACC AGTCCACGCT CAGCATCCTG CTCATCGTCG GCGTGGTGAC GGTCCTGGCC
CTGTGCTCGG TGATCGCCGG CCTGGACAAG GGCATCAAGG TGCTGTCGAA CGCCAACATC
CTGGCCGCCG TGGGCCTGAT GGTGTTCGTC CTGATCTCGG GCCCGACGCT GCACCTGCTG
CGCGGCACCA TCGAGGGCGT GGGCCTGTAC GCCCAGAACC TGCCCTACCT GGCCTTCTGG
AACGACTCGT TCGACGACAA CCCCGGCTGG CAGGACGGCT GGACCATCTT CTACTGGGCC
TGGACCATCA CCTGGTCGCC CTTCGTCGGC ATCTTCATCG CCCGCATCTC CCGCGGTCGC
ACCATCCGCC AGTTCATCGT CGGCGTGCTC GCCGCCCCGG TGAGCTTCTC CATCATCTGG
TACGGCATCT TCGGCTTCGC CAGCTTCGAC ATCATCCGCA ACCAGGAGGG TGGCGGCCAG
CTGGTCGACT CCGTGCTCAA CGACGGTGCC GAGGTGGCGC TGTTCGAGTT CCTGGAGCAC
TTCCCGTTCA CCACGTTCAT GTCGGTCTTC TCGATCGCCA TCGTGGCCAT CTTCTTCGTG
ACCTCGATGG ACTCGGCCTC GCTGGTGATG GACTCCATGG CCCGCGGTCA CGACGAGGAC
GAGCGGGTGC CGGTCCTCCA GCGGATCATC TGGGCCATCA CCGTCGGTGC CATCGCGGCG
GTGCTGCTGA CCTTCTCGCC GGATGCCGGC ATCTCGGCCC TGGAGGACGT CATCACGATC
GTGGGCCTGC CCTTCTTCGT GATGGGGTAC CTCATGATCT GGGCGCTGAA CCGGGCCATG
AAGGAGGACG CCGGTGAGCT CCTCCCGCTG GCCACGCGCC GGTACCGCAA GGTGCTGCCG
CCCGAGGAGG TCGAGCGTCG CCGCGCCGAG GGCGACGAGG CGTGGTCCGA CACGGCCCTC
GAGCAGGACC CGCACTACAT GGACAGCGAG GGACACGTCA TCGCGGCCCC CGAGACCGCG
GCCTACGAGC AGCACGAGCT GTACGAGGCC GGGGAGGACC GTCCCTCCGA GGAGGTGACC
GGCTCCAGCC GGTTGAACGG CACCGCCTGA
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| Protein sequence | MTTHTDHDRG THMLQKLHDA MGLRTSPTIF FGSFAVAIVF IVITLSFPGT MANTFESGSD
WLLGNLGWFY ILGVTVFLIY LIVTAMSRFG RIRLSPHDEA PDHSFPAWFA MLFAAGIGTI
LMFWGVAEPV NHFANPPMAD VEPESVDAAR EAMSFTLYHF GLHTWTIFAL PSLAFAYFIY
QRNLPPRVSS LFHPLLGDKG IHGPIGKTID IVAIVGTLFG VAVSIALGTL QINAGLSAVL
GIDQSTLSIL LIVGVVTVLA LCSVIAGLDK GIKVLSNANI LAAVGLMVFV LISGPTLHLL
RGTIEGVGLY AQNLPYLAFW NDSFDDNPGW QDGWTIFYWA WTITWSPFVG IFIARISRGR
TIRQFIVGVL AAPVSFSIIW YGIFGFASFD IIRNQEGGGQ LVDSVLNDGA EVALFEFLEH
FPFTTFMSVF SIAIVAIFFV TSMDSASLVM DSMARGHDED ERVPVLQRII WAITVGAIAA
VLLTFSPDAG ISALEDVITI VGLPFFVMGY LMIWALNRAM KEDAGELLPL ATRRYRKVLP
PEEVERRRAE GDEAWSDTAL EQDPHYMDSE GHVIAAPETA AYEQHELYEA GEDRPSEEVT
GSSRLNGTA
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