Gene Ksed_03000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_03000 
Symbol 
ID8371810 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp289900 
End bp290697 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content73% 
IMG OID644990596 
Producthydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 
Protein accessionYP_003148142 
Protein GI256824182 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0351] Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase 
TIGRFAM ID[TIGR00097] phosphomethylpyrimidine kinase 


Plasmid Coverage information

Num covering plasmid clones50 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCACCC CGACCGTCCT GTCCATCGCC GGCTCCGACC CTTCGGGCGG CGCCGGCATC 
CAGGCCGACC TCAAGACCTT CAGCGCCCTC GGTGCCTACG GCTGCGCAGC GCTGACGGCC
CTCACCGCAC AGAACACGCG GGGCGTCACC GGGATCCACC CGGTGCCGCC GGAGTTCGTG
CGCGACCAGG TGCTCACTCT GGTGGACGAC GTGCAGGTCG ATGCGGTGAA GATCGGCATG
CTCGGCAGCG CGGCCGTGGC AGAGGCGGTG GCCGACCTGG TGGGGGAGGT CCTGGACTGC
CCCGTGGTGC TCGACCCGGT GATGGTGTCG ACCGCCGGGG CGCGGTTGCT GGACCGCGAC
GCCGTCGAGG CCGTGCTGCG CCTGGCCCCG CTGGTCGACC TCGTGACCCC CAACGGCCCG
GAGGCCGCGG TGATGCTGGG CTGCGAGGAG GCGCGGACGG TCACCCAGCA GACCGAGCAG
GCACAGGAGC TGTACCGACG GCTGGGCACC CGCGTGCTGC TCAAGGGCGG TCACCTGCCG
GGGCCGCGCG CCACGGACGT GCTGGCGGAC CACGACGGGA CGGCGACGCT CACCGCATTG
AGGGTGGTCA CGGACAACAC GCACGGGACG GGGTGCACGC TCTCCTCGGC GATCGCGGCG
CTGCTGCCGC AACGGGGGGA CTGGGGCGAC GCGATCGAGG GGGCGAAGGA CTACCTGACG
GACGCGCTCC GGCGGAGCGA CGAGCTGGGC ATCGGGCACG GCGCAGGCCC GGTCCACCAC
TTCCATGAGT GGTGGTGA
 
Protein sequence
MSTPTVLSIA GSDPSGGAGI QADLKTFSAL GAYGCAALTA LTAQNTRGVT GIHPVPPEFV 
RDQVLTLVDD VQVDAVKIGM LGSAAVAEAV ADLVGEVLDC PVVLDPVMVS TAGARLLDRD
AVEAVLRLAP LVDLVTPNGP EAAVMLGCEE ARTVTQQTEQ AQELYRRLGT RVLLKGGHLP
GPRATDVLAD HDGTATLTAL RVVTDNTHGT GCTLSSAIAA LLPQRGDWGD AIEGAKDYLT
DALRRSDELG IGHGAGPVHH FHEWW