Gene Ksed_02990 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_02990 
Symbol 
ID8371809 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp289256 
End bp289903 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content75% 
IMG OID644990595 
Productthiamine-phosphate pyrophosphorylase 
Protein accessionYP_003148141 
Protein GI256824181 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0352] Thiamine monophosphate synthase 
TIGRFAM ID[TIGR00693] thiamine-phosphate pyrophosphorylase 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACCTCT CCCTCTACCT GGTCACCGAC AGCGCCATGG CCGGGTCACG GGGCCTGGCC 
GACGTCGTCG CGCGGGCCGT CGCGGCCGGG GTCACCTGCG TGCAGCTGCG GGAGAAGGCA
GCCTCCGATG AGGAGGTGGT TGCCCTGGGG CGCCAGCTCG TCGAGATGCT CGCGGGCACC
GGGGTGCCCC TCCTCATCGA CGATCGGGTG CACCTGGTGC ACCCCATCGG GGCCGATGGG
GTGCACATCG GTCAGGAGGA CACCCCACCG ACCGCGGCCC GCGCGGCGCT GGGCCCCGAG
GCCATCATCG GCCTCTCCGT CCACGACGCA GCGCAGGTCG ATGCCGCCAA CGCCCTGCCA
CCGGCGACAC TCGACTACAT CGGTCTGGGA CCGGTCTGGG CGACGGGCAC CAAGGATGGG
CACGCACCCC CCATCGGGCC CGAGGGGCTG GCCGACCTGC GCCGGCGCAG CCACCACCCG
GCCGTGGCGA TCGGGGGCGT GAAGGCCCAC ACACTGGCCG AACTCGCGGG GTCGGGCGTC
GAGGGGGTGG CGGTGGTCAG CGCGATCTGC GCCGCAGCGG ACGTCCCGGC GGCCACCCGG
GAGCTGCGAG AGGCCCTGGC CGCGTCGCCC CTGCAGGGGG AGCTGTGA
 
Protein sequence
MDLSLYLVTD SAMAGSRGLA DVVARAVAAG VTCVQLREKA ASDEEVVALG RQLVEMLAGT 
GVPLLIDDRV HLVHPIGADG VHIGQEDTPP TAARAALGPE AIIGLSVHDA AQVDAANALP
PATLDYIGLG PVWATGTKDG HAPPIGPEGL ADLRRRSHHP AVAIGGVKAH TLAELAGSGV
EGVAVVSAIC AAADVPAATR ELREALAASP LQGEL