Gene Ksed_02360 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_02360 
Symbol 
ID8371748 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp234029 
End bp235018 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content68% 
IMG OID644990540 
Productpyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase component beta subunit 
Protein accessionYP_003148086 
Protein GI256824126 
COG category[C] Energy production and conversion 
COG ID[COG0022] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones58 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCCA AGAAGATGAC GCTGGCCAAG GCACTCAATG CCGGCATGCG CAAGGCCATG 
ACCGATGACG ACAAGGTGGT GCTGCTCGGT GAGGACATCG GCCGCCTGGG TGGCGTGTTC
CGCATCACCG AGGGCCTGGT CGACGACTTC GGCGAGGAGC GCGTGATCGA CACGCCGCTG
GCCGAGTCCG GCATCGTGGG CACCGCGGTG GGCCTGGCCC TGCGCGGCTA CCGCCCGGTG
GTGGAGATCC AGTTCGACGG TTTCGTGTAC CCGGCCTTCG ACCAGATCAT CAGCCAGGTC
TCCAAGATGC ACGCCCGCTC GCTGGGCCAG CTGAAGATGC CGATCGTCAT CCGCATCCCC
TTCGGCGGCG GCATCGGTGC CGTGGAGCAC CACAGCGAGT CCAACGAGGC CTACTTCGCC
CACACCGCCG GCCTGAAGGT CGTCTGTGCG GCCACGCCGG AGGACGGCTA CTGGATGATG
CAGCAGGCCA TCGCCAGCGA CGACCCGGTG GTCTTCTACG AGCCCAAGCG CCGCTACCAC
GAGAAGGGCG AGGTGGAGTT CTCCACCGAC GGGCAGGCGA CCACCGACCT GCACGCCTCC
CGCGTCGTGA AGGAGGGCTC GGACGTCACC CTGGTGACCT ACGGCCCGAT GGTGAAGACC
TGCATGCAGG CCGCCGCCGC GGCCGCGGAG GAGGGGCGTT CGCTGGAGGT CATCGACCTG
CGCACGCTCA ACCCGCTGGA CCTGGCCCCG GTGGTCGAGT CGGTCAAGAA GACCGGCCGC
GTGGTCGTGG TGCACGAGGC CCCGACCTTC CTGGGCATGG GCTCGGAGAT CGCCGCGCAG
GTGACCGAGA AGTGCTTCTA CCACCTGGAG GCCCCGGTGG CTCGCTGTGG CGGGTACAAC
ATCCCCTACC CGCCCAGCCG GTTCGAGGAG GAGTACCTCC CCAACCTGGA CCGCATCCTG
TTCCACGTCG ACGAGGTCCT GGCGCACTGA
 
Protein sequence
MSAKKMTLAK ALNAGMRKAM TDDDKVVLLG EDIGRLGGVF RITEGLVDDF GEERVIDTPL 
AESGIVGTAV GLALRGYRPV VEIQFDGFVY PAFDQIISQV SKMHARSLGQ LKMPIVIRIP
FGGGIGAVEH HSESNEAYFA HTAGLKVVCA ATPEDGYWMM QQAIASDDPV VFYEPKRRYH
EKGEVEFSTD GQATTDLHAS RVVKEGSDVT LVTYGPMVKT CMQAAAAAAE EGRSLEVIDL
RTLNPLDLAP VVESVKKTGR VVVVHEAPTF LGMGSEIAAQ VTEKCFYHLE APVARCGGYN
IPYPPSRFEE EYLPNLDRIL FHVDEVLAH