Gene Ksed_02350 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_02350 
Symbol 
ID8371747 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp232819 
End bp234024 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content70% 
IMG OID644990539 
Productpyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase component alpha subunit 
Protein accessionYP_003148085 
Protein GI256824125 
COG category[C] Energy production and conversion 
COG ID[COG1071] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit 
TIGRFAM ID[TIGR03181] pyruvate dehydrogenase E1 component, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones57 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGACC CCAACGTCGA GGCCGCGCAG GACGCGCTGC AGGAGAGCGC CAGCCGCGCC 
CCGGAGGACG CCGGCGCCCA GCCGGTCGAC GTCACCGACG GCGGGCCCGA GATGGTCCAG
TTCCTGACCC CCGAGGGTGA GCGCATCGAG ACCGAGCTGA ACGCTCCGTA CGCGCGCTAC
CTCGAGTCGA TCGATGCCGA GGCCATCAAG GCGATGCAGC GCGACATGGT GTTGGTGCGC
CGCGTGGACG CCGAGGGCTT CGCCCTGCAG CGCCAGGGCG AGCTGGGCCT GTGGCCCTCG
CTGCTCGGCC AGGAGGCCGC CCAGGTGGGC ATGGGCCGCG CCCTGAAGCC GCAGGACTAC
GTCTTCCCCG GCTACCGCGA GCACGGTCTG GCCTGGACCA AGGGCGTCGA CCCGGAGAAC
CTGCTGGGCA TGTTCCGCGG CGTGAACCAC GGCGGTTGGG ACTCCAAACA GAACAACTTC
CACCTGTACA CGATCGTGAT CGGCAACCAG ATGCTGCACG CCACCGGGTA CGCCCGCGGC
GTGCAGCTGG ACGGCGCCTG GGCGACCGGT GACGACACCG TCGACACTGC CGTGGTCGCG
TGCACCGGCG ACGGTGGCAC CTCGCAGGGT GACTACAACG AGGCGATGGT GTTCGCGGCC
GTCGCGAAGT CGCCGTGCGT GTTCTTCGTG CAGAACAACC AGTGGGCCAT CTCCGAGCCC
ACCCACCGCA ACTTCGTGGT GGAGCCCTTC AAGCGTGCCG CCGGCTTCGG CTTCCCGGGC
GTCCGGGTGG ACGGCAACGA CATCCTCGCC TCGCTCGCGG TCGGCGCCTG GGCGCTGGAC
CACGCCCGCT CCGGCAAGGG CCCGGTGCTG GTGGAGGCCT TCACCTACCG CATGGGTGCG
CACACCACCT CCGACGACCC CACCAAGTAC CGCGAGGACT CGCAGGTCGA GGCGTGGCGC
GCGAAGGACC CCATCGACCG CCTGAAGAAG CACATGGTGG CCCAGGGGAT TGGCGACGAC
GAGTTCTTCG CCGCGATCGA CGCCGAGGCC GGCGAGATGG CCGCCCGCGT CCGCAAGGCC
TGCCAGACCA TGCCGGACCC CGAGCTGGGG ACCATGTTCG ACCACACCTA CGCCGCTGAG
CACGCCCCCC TGAACGACGA GGGTCGCGAG TTCGTCGAGT ACCACGCCGG CTTCGAAGGG
AACTGA
 
Protein sequence
MSDPNVEAAQ DALQESASRA PEDAGAQPVD VTDGGPEMVQ FLTPEGERIE TELNAPYARY 
LESIDAEAIK AMQRDMVLVR RVDAEGFALQ RQGELGLWPS LLGQEAAQVG MGRALKPQDY
VFPGYREHGL AWTKGVDPEN LLGMFRGVNH GGWDSKQNNF HLYTIVIGNQ MLHATGYARG
VQLDGAWATG DDTVDTAVVA CTGDGGTSQG DYNEAMVFAA VAKSPCVFFV QNNQWAISEP
THRNFVVEPF KRAAGFGFPG VRVDGNDILA SLAVGAWALD HARSGKGPVL VEAFTYRMGA
HTTSDDPTKY REDSQVEAWR AKDPIDRLKK HMVAQGIGDD EFFAAIDAEA GEMAARVRKA
CQTMPDPELG TMFDHTYAAE HAPLNDEGRE FVEYHAGFEG N