Gene Ksed_01890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_01890 
Symbol 
ID8371701 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp190634 
End bp192073 
Gene Length1440 bp 
Protein Length479 aa 
Translation table11 
GC content66% 
IMG OID644990496 
Productcytochrome bd-type quinol oxidase, subunit 1 
Protein accessionYP_003148042 
Protein GI256824082 
COG category[C] Energy production and conversion 
COG ID[COG1271] Cytochrome bd-type quinol oxidase, subunit 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGCAC TCGAACTCGC CCGTTGGCAG TTCGGCATCA CGACCGTCTA CCACTTCTTC 
TTCGTCCCGA TCACGATCGG GCTGAGCTTC GTGGTCGCAC TGATGCAGAC GATCTGGATC
CGTACCCGCA ACCCGGAGTG GCTGCGGCTG AGCAAGTTCT ACGGCAAGCT CTTCACCATC
AACTTCGCCC TGGGGCTGGT CACCGGCATC GTCCAGGAGT TCCAGTTCGG CATGAACTGG
TCGGACTACT CGCGCTTCGT CGGTGACATC TTCGGCGCCC CGCTGGCCAT CGAGGCCCTG
CTGGCCTTCT TCCTGGAGTC CACCTTCCTG GGCCTGTGGC TGTTCGGCTG GGGCCGCATC
CCCGAGGTGC TGCACAACGC CGCCATCTGG CTGGTGCACA TCGGCACCGC GCTGAGCGCC
TACTTCATCC TGGCCGCCAA CTCGTTCATG CAGAACCCGG TGGGTTACGA GAACAACCCT
GAAACCGGGC GCGCGGAGCT GGTGGACTTC TGGGCCGTGC TCACCAACAA GGTGCAGCTG
GTGACCTTCC CGCACGTCAT GGCCGCGGCC ACGATGACGG GCGCCGGCCT GGTCGTGGCC
GTCGCCGGCT GGCACCTGTG GCGCAAGAAG TTCCCCAAGG ACGCCGGCAT GTACCGCAAG
GCCCTGCGCC TGGGCGCGTG GATGCTGCTC ATCGGCGGCC TCGGCACCGC GGTGACCGGC
GACATCCAGG GCAAGATCAT GACCGAGGTG CAGCCCATGA AGATGGCTGC CGCCGAGGGC
CTGTACGAGA GCGACGAGCA CTGCGCCGAC TTCTCCATCC TCACCATCGG CACCCCCGAC
GGCGAGCACG AGAAGTTCGC CATCACCGTC CCCTGCGTGC TGAGCTATCT GGCCACCGGT
GACTTCAACG GCGAGGTCAA GGGCATCAAC GAGCTCAAGG AGATCTACGC CGAGCAGTAC
GGCAACTCCG GCGAGGCCCG CCTCGAGGTC AGCGACTACA CCCCGAACAT CCCGGTGACC
TACTGGTCCT TCCGCTGGAT GATCGGCATG GGCATGATCG GCGCCGCCGC CGCGGCCGCC
CTGCTGTGGG CCACCCGCGG TGACCGCACC CAGCTGAACA GCAAGTGGTG GTTCCCCGCC
ACCCTGCTGG CCCTGTTCGG ACCACTCCTG GCCAACAGCC TCGGCTGGAT CTTCACCGAG
ATGGGCCGCC AGCCCTGGGT CGTCTTCGGT CTGATGAACA CCGAGGACGG CGTCTCCCCC
GGCGTCGGCG CCACCGAGGT GCTCATCTCG ATGCTGGTCT TCACCCTGCT CTACGGCGCC
CTCGCCCTGG TCGAGGTCAG GCTGATGGTG AAGTACGCCT CCGCCGGTGC CGAGCACGTG
GACGCCGAGA AGGCCCAGCG CCTCACGGCC GACGACGAGC CGCACGTGTT CGCCTACTGA
 
Protein sequence
MDALELARWQ FGITTVYHFF FVPITIGLSF VVALMQTIWI RTRNPEWLRL SKFYGKLFTI 
NFALGLVTGI VQEFQFGMNW SDYSRFVGDI FGAPLAIEAL LAFFLESTFL GLWLFGWGRI
PEVLHNAAIW LVHIGTALSA YFILAANSFM QNPVGYENNP ETGRAELVDF WAVLTNKVQL
VTFPHVMAAA TMTGAGLVVA VAGWHLWRKK FPKDAGMYRK ALRLGAWMLL IGGLGTAVTG
DIQGKIMTEV QPMKMAAAEG LYESDEHCAD FSILTIGTPD GEHEKFAITV PCVLSYLATG
DFNGEVKGIN ELKEIYAEQY GNSGEARLEV SDYTPNIPVT YWSFRWMIGM GMIGAAAAAA
LLWATRGDRT QLNSKWWFPA TLLALFGPLL ANSLGWIFTE MGRQPWVVFG LMNTEDGVSP
GVGATEVLIS MLVFTLLYGA LALVEVRLMV KYASAGAEHV DAEKAQRLTA DDEPHVFAY