Gene Ksed_01710 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_01710 
Symbol 
ID8371683 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp170343 
End bp171158 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content74% 
IMG OID644990478 
ProductrRNA methylase 
Protein accessionYP_003148024 
Protein GI256824064 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0566] rRNA methylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones54 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.43805 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCCCGG CCCCACTGCA CATCAGCAGC CCGGCGAACC CCCGCATCAA GGCGCTGCGT 
GAGTTGCGGC GCCGTCGGGC CCGTGAGGCC ACCGGCAGCA CGCTGGTGGA GGGCTACGAG
GAGCTGCAGA TCGCCCTGGC CGGCGGCGTG CGCCCGCGGG AGCTGTACCT CTGTGAGGAG
CTGATGGCCG ACCCCGCGGC CCAGCAGGAC GTGGTGGAGC TGGCCTCGCA GCGGGGGGCC
GGCATCGTCA CGCTGAGCCG GGCCGTCTTC GAGAAGGCGG CCTACCGGGA GGGGCCCGAC
GGCTTCCTGG CCGTCGTGCC CACCCCCGGG GTGGCGCTGG CCGACCTGCC ACAGCCGGAC
GGGCCGGGGC TGTACGTGGT GGCCGAGCAC CTGGAGAAGC CGGGCAACCT GGGCGCCATC
CTGCGCACGG CGGACGCGGC GGGGGTCGAT GCGGTGATCG CGGCCGACCC GGTGACCGAC
TGGGGCAACC CGAACGTGGT GCGCGGCTCG AAGGGGACGG TGTTCTCGGT GCCGGTGGCC
ACCGCACCGA CTCCCGAGGT GCTGGACTTC CTGGCCGGGC GCGGGATGAC GCTGGTGGCG
ACCACGCCGC ACACCGAGGT GCTGCACACG CAGGTGGACC TGACCGGCCC CGTCGCGATC
GCGGTCGGGG CGGAGAAGAC GGGGCTCACC GCATCGGCGC TGGAGGGCGC GACCCACCGG
GTGAGGATCC CGATGGTGGG TCGCGCGAAC TCGCTCAACG TCGCCACGAG CGCGGCGATC
GTGGTCTACG AGGCGGTGCG GCAGCGGCTC GGCTGA
 
Protein sequence
MSPAPLHISS PANPRIKALR ELRRRRAREA TGSTLVEGYE ELQIALAGGV RPRELYLCEE 
LMADPAAQQD VVELASQRGA GIVTLSRAVF EKAAYREGPD GFLAVVPTPG VALADLPQPD
GPGLYVVAEH LEKPGNLGAI LRTADAAGVD AVIAADPVTD WGNPNVVRGS KGTVFSVPVA
TAPTPEVLDF LAGRGMTLVA TTPHTEVLHT QVDLTGPVAI AVGAEKTGLT ASALEGATHR
VRIPMVGRAN SLNVATSAAI VVYEAVRQRL G