Gene Ksed_01560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_01560 
Symbol 
ID8371668 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp155994 
End bp156608 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content71% 
IMG OID644990463 
Productriboflavin synthase, alpha subunit 
Protein accessionYP_003148009 
Protein GI256824049 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0307] Riboflavin synthase alpha chain 
TIGRFAM ID[TIGR00187] riboflavin synthase, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones50 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.913253 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTCACCG GAATTATCGA GGAGCTCGGC CGCATCGAGG TCATCGACCC GGCGGGGGAC 
GACGTTCGCC TGACCGTCCA CGGCCCGCTG GTCACGAGCG ATGCCTCCCG CGGCGACTCG
ATCGCCGTGA ACGGCGTGTG CTTGACGGTC ACGGACCTGG GCGAGGCGGG TGACTCCGCA
TCGCCTGCCA GGTTCACCGC CGACGTGATG CCCGAGACGC TCACCCACAG CTCGCTCGGC
GCCCTGACCC CCGGCAGCCC GGTCAACCTG GAGCGCGCCG TGCGGGTCGA CGCCCGGCTG
GGTGGCCACA TCGTCCAGGG GCACGTCGAC GGTGTCGGCA CGATCGCCGA CCGGACCCCC
GGCGACCGCT GGGAGGTCGT CCGCGTGAGC ATCCCCGTCG CACTGGCCCG GTACGTCGTG
GACAAGGGGT CGATCACCCT CGATGGCGTG TCCCTCACCG TGAGTGGCGT GGGCACCGAC
TGGCTCGAGG TGAGCCTCAT CCCGGAGACC CTTGCCCGGA CCACGCTGGG CACGGCCGCG
GTCGGCAGCC CGGTCAACGT GGAGGTGGAC GTGCTGGCCA AGTACGTCGA GAAGCTGGTG
GGAGGCACCC GATGA
 
Protein sequence
MFTGIIEELG RIEVIDPAGD DVRLTVHGPL VTSDASRGDS IAVNGVCLTV TDLGEAGDSA 
SPARFTADVM PETLTHSSLG ALTPGSPVNL ERAVRVDARL GGHIVQGHVD GVGTIADRTP
GDRWEVVRVS IPVALARYVV DKGSITLDGV SLTVSGVGTD WLEVSLIPET LARTTLGTAA
VGSPVNVEVD VLAKYVEKLV GGTR