Gene Ksed_01270 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_01270 
Symbol 
ID8371640 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp132407 
End bp132904 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content68% 
IMG OID644990437 
Productredox-sensitive transcriptional activator SoxR 
Protein accessionYP_003147983 
Protein GI256824023 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID[TIGR01950] redox-sensitive transcriptional activator SoxR 


Plasmid Coverage information

Num covering plasmid clones69 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCACGAGA GCCACGACAT CACGATTGGC CAGTTGGCCC GTCGTGCTGG CGTGTCGCCC 
CCCACGCTCC GCTACTACGA GAGCCTCGGC CTGATCGCCT CGAGACGCAC CGCAGGCAAC
CAGCGCCGAT ACCCTCGCCG GACCTTGCGA CGTGTGGCCT TCATCCGCGC AGGGCAACGT
ATGGGGCTAC CGCTCGCGCG CATCGCTGAG GCGCTGGCCG AGCTGCCTGA CGATCACCCT
CCGACGACGA GGGACTGGCA GCGGGTCTCC GCGGCGTGGC ACCAGGACCT GCAAGCTCGC
ATCGACCAAC TCGTCGCACT GCGCGACGCC GCGACAGACT GCATCGGCTG CGGGTGCTTG
TCCGTCGACC GTTGCACCCT GGTCAACCCC GAGGACACGC TTGGCACCCA AGGTCCCGGG
GCGAGGAACC TGCTGCACCA CAGGACGGAA AGCGCCGGTG AAGATGCCGG CTGCGAGGAC
GACACGAGGC AACGGTGA
 
Protein sequence
MHESHDITIG QLARRAGVSP PTLRYYESLG LIASRRTAGN QRRYPRRTLR RVAFIRAGQR 
MGLPLARIAE ALAELPDDHP PTTRDWQRVS AAWHQDLQAR IDQLVALRDA ATDCIGCGCL
SVDRCTLVNP EDTLGTQGPG ARNLLHHRTE SAGEDAGCED DTRQR