Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ksed_01060 |
Symbol | |
ID | 8371619 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Kytococcus sedentarius DSM 20547 |
Kingdom | Bacteria |
Replicon accession | NC_013169 |
Strand | + |
Start bp | 108987 |
End bp | 110609 |
Gene Length | 1623 bp |
Protein Length | 540 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 644990417 |
Product | phosphodiesterase/alkaline phosphatase D |
Protein accession | YP_003147963 |
Protein GI | 256824003 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3540] Phosphodiesterase/alkaline phosphatase D |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 53 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCCCA CGAAATCCCT GCCCCACACC ACATCCGGCG CCCTGCCCGT CGACTCCTCG TGGCCCGAGC AGCCGACCGC GTCGCGCACC GCACCCGGCG CCTCGCCCTC CCGCCGCCTG GTCCTGGCCA CCGGCGCCGC CACGCTCGGC GCCCTAGCCC TGGCCACCGG CCATGCCACC GCCGGCGATG CCTACCCGTT CACCCTGGGC GTCGCCTCGG GTGACCCGAC TCCCGACGGC GTGGTGCTCT GGACGCGCCT GGCCACCGAC CCCGTGGCCC CCGACGGCCT CGGCGGGCTC GGCCAGACCA CCTCCACCGT CGAGTGGGAG CTGGCCACCG ACGAGTCCTT CCGTCGCATC GTGCGCCGGG GCACCGTCAC CACCGACGCC TCGGTCGGCC ACAGCATCCA CATCGAGCTC GCCGGCCTGC CGTCCTCTGC CCGGTTCACC TACCGCTTCC GGGCCAACGG CCACCTCTCC CCGGTGGGGC ATACGCGGAC CGCTCCGGCC CCGGGCAGCG ACGAGCGCGC CACCTTCGCC GTCGCCTCCT GCGCGCAGTG GGAGCACGGG TTCTTCACCG CCTACCGCCA CATCGCGGCC GAGCAGCCGG ACCTGGTCGT CCACCTGGGC GACTACATCT ACGAGCACGG CCCCGGCGGC TACCCGGTGT CCTCCGGCCG CGCCCGCACC ATGGTGGGCG GGGAGATCCA CTCGCTGGCC GACTACCGCC GCCGCCACGC CCTCTACAAG TCCGATGCGG ACCTGCAGGC CGCGCACGCC GCCGCCCCCT GGGTGGTGGT CTTCGACGAC CACGAGGTCG ACAACGACTG GGCCGAGCTC TACCACGAGG TCTGGGGCAA GGTGCCGGCC TTCGCCGAGC GCCGTGCCGC CGGTTTCCGC GCCTATTGGG AGAATATGCC GCTGCGCCGC AGCTCGGTCC CGGGCGCCGA CGGCATCCAG CTCTACCGTC GCCTCACCTG GGGGCGCATG GCCACGCTGC ACGTGCTGGA CACGCGCCAG TACCGGTCGA ACCAGACCGG CCTCATCGGC CCGGTGCGCA GCACCTACGA CTCCCGCCGC ACCATGCTGG GGTCCACCCA GGAGGCCTGG CTCGATGAGG GGCTGCGCAC CTCGGGAGCC CGCTGGGACC TGCTGGGCCA GCAGGTGATG GTGGCGCAGT ACGACATGAT GGCCGGCCCC GGGTTCCTCA CCAACCAGGA CGCCTGGGAC GGGTACGTGG CCGCCAAGGA CCGGCTGCTC ACGAGCCTGG AGCGCTCTGA TGCCCGCAAC CCGGTGGTGC TCACCGGTGA CGTGCACGAG TCCTTCGCGA ACGACCTGTG GCGCACCACG GACTCGGGGC GGGTGACGCT GGGCTCGGAG TTCGTCACCA CCTCGGTCAC CTCCGGCGGG GACGGCAAGG ACTCACAGTT CACCGGGGAC GCCGACAACC CCCACATCCG CTACCACGAG ACCACCCGCG GCTACCTGCG GCTGGACCTC ACCGCCGACT CGATGGCGGG GACCTTCCGC GCCGTCGACA CCGTCAGCTC CCGCGGTGGC GCCGTCCGCA CCGACGCCCG GTTCGCGCTG GAGGACGGCC GCCGCGGCCT GCAGGCGGTC TGA
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Protein sequence | MTPTKSLPHT TSGALPVDSS WPEQPTASRT APGASPSRRL VLATGAATLG ALALATGHAT AGDAYPFTLG VASGDPTPDG VVLWTRLATD PVAPDGLGGL GQTTSTVEWE LATDESFRRI VRRGTVTTDA SVGHSIHIEL AGLPSSARFT YRFRANGHLS PVGHTRTAPA PGSDERATFA VASCAQWEHG FFTAYRHIAA EQPDLVVHLG DYIYEHGPGG YPVSSGRART MVGGEIHSLA DYRRRHALYK SDADLQAAHA AAPWVVVFDD HEVDNDWAEL YHEVWGKVPA FAERRAAGFR AYWENMPLRR SSVPGADGIQ LYRRLTWGRM ATLHVLDTRQ YRSNQTGLIG PVRSTYDSRR TMLGSTQEAW LDEGLRTSGA RWDLLGQQVM VAQYDMMAGP GFLTNQDAWD GYVAAKDRLL TSLERSDARN PVVLTGDVHE SFANDLWRTT DSGRVTLGSE FVTTSVTSGG DGKDSQFTGD ADNPHIRYHE TTRGYLRLDL TADSMAGTFR AVDTVSSRGG AVRTDARFAL EDGRRGLQAV
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