Gene Ksed_01000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_01000 
Symbol 
ID8371613 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp102451 
End bp103569 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content76% 
IMG OID644990411 
Productsignal transduction histidine kinase 
Protein accessionYP_003147957 
Protein GI256823997 
COG category[T] Signal transduction mechanisms 
COG ID[COG4585] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGCCC CGGCGCCGGA GCGGTCCCCG GCCGCGTCGT CCGGCCCCGC CACACACCCC 
GCAGCCCCGG GCCCGCGACG GGACGACCCC TACTACCGGT GGTCGCTCGT CATCGCCATC
GTCTTCATGG TCTTCCTGGC CTTCCCCCTG CTGGGCGCCG CGCAGGCCGA CGCGGCACCG
CTGGCCCGAG GGGTCACGGT CGCCGCCATC ATCGCGTTCG CCGCGCTCTA CCTGTGGGGC
TACAGCGAGC GCCGCCCGTG GTGGGTGCTC GCGGGGATGC TCGCGCTCAT GGTGGCCACG
GTCCCCGTGC TGGGCGTCGG GGCCTGCGGC CTCCTGCCGT ACGTGGCCAC GCACGCCGCG
CTCGAGCTGC CCCGCCCGGC GCACTACGCG GCCACCGCCG CGGCGGCGCT GACCCCGCTG
GTGGTGGCGC TGGTCGAACC GCCGGCTGCA CTGTTCGCCC TCATCGCGGC CCCCGTCGGC
GGCGGCATGC TGGCGGTCCG GCAGATGATC CACCGCGGTG TCGAGCTGGG TGAGGTGGAG
ACGGCCCTGG CCATCACCGC CGAGCGCGAG CGGGTGGCCC GGGACGTGCA CGACGTGCTG
GGGCACTCGC TCACCGCCAT CGTGCTGAAG GCCGACCTCG CCGAGCGCCT GGTGGGACGC
GACGACGACC GGGCCCGCGA CGAGATCTCG CAGGTGGCCG CACTGGCCCG CCAGGCGCTC
AGCGAGGCCC GGTCGACCGT GGTCGGCCTG CGGTCCGCCG ACCTGGCCGA TGAGGTGGAG
CGCGCCCGGG ACCTGGCCTC GAGCAGCGAG GTCACCCTGA CCGTGCACGG TGACCCCCAG
GACGTGCCCC CGCGCCACCG TCCCGTCGCC GCCTGGATCC TGCGTGAGGC GGTCACGAAC
GTGAGCCGGC ACGCCCGGGC CTCGAGGGTG GACGTCACCC TGGCGCCCGA CCGCCTGGTG
GTGTGTGACG ACGGGCAGGG TCTGACCGGT GAGCCGTCCG GATCGGGGAG CGACGGCATC
CGTGAGCGCG CCGCCGCTGC CGGGGGCACC GTGGTGTGGG AGGACAACGC CCCGGGCACC
CGTCTGATGG TCACCCTGCC GACGGGAGCA GCAGCATGA
 
Protein sequence
MSAPAPERSP AASSGPATHP AAPGPRRDDP YYRWSLVIAI VFMVFLAFPL LGAAQADAAP 
LARGVTVAAI IAFAALYLWG YSERRPWWVL AGMLALMVAT VPVLGVGACG LLPYVATHAA
LELPRPAHYA ATAAAALTPL VVALVEPPAA LFALIAAPVG GGMLAVRQMI HRGVELGEVE
TALAITAERE RVARDVHDVL GHSLTAIVLK ADLAERLVGR DDDRARDEIS QVAALARQAL
SEARSTVVGL RSADLADEVE RARDLASSSE VTLTVHGDPQ DVPPRHRPVA AWILREAVTN
VSRHARASRV DVTLAPDRLV VCDDGQGLTG EPSGSGSDGI RERAAAAGGT VVWEDNAPGT
RLMVTLPTGA AA