Gene Ksed_00900 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_00900 
Symbol 
ID8371603 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp96224 
End bp97285 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content68% 
IMG OID644990403 
ProductMajor Facilitator Superfamily transporter 
Protein accessionYP_003147949 
Protein GI256823989 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones62 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGATCG CACCGCCCTT GGGTTCCGCC CGCCGTATCG CGTTCACGGC GGGCGGAGCC 
TTTGCCGCGT TCTACATCTT CTACACCACC GCCCCGATCG CCTTTGCTGG GGCGAGCCTC
GGGGCCGGGG TGCGGGTGGG CATCGTGATG GCCGTCGTCG TCGCCGTACA ACCGTTCGTG
GGTCTGCTCG GCCGATGGAT GGCGACCAGG CGGCTACAGG TTACCTCGGC GGCTATCTCG
ATGGGGCTCG GCAGCGCGAT CATGCCGTTT GCCGGGCACT GGCCTGGCAT GCTCCTTCTC
GCGGTCGGCT TCGGGGTCTT CGTCGTCGCC AGCACCGCCT GGATCAAGGA GACCGCACCC
TCGGGTCTGC TCGGCAGAGC GCTCGGCCTC TACGGCTTCG GCTCGGCAAT CGGAGGCGCA
CTCGGTGCCC CTCTCGGCCT CATCCTCATC GAACAGGCCG GTACCCCCGG CACCGCCGTA
GTGGGCAGTC TCGTCGCCCT CGCCTCCATC CTGCCGGTTC TGCGCCTGAG AACCGCCGTG
AGTTCGGATG TTTCTCCCGG GGAGAGCACC GCATCGGAGA CCGCGCCGAG GGCCTCCCGC
CTCTGGAGTA ATAGCCGTCT GATCGGACTC GGCGCGCATC TGCTCGCGGT GACCATCTAC
GCCGCCGCAC TCTCCGGCCT CGCAAGCGAC CAGAACGGAC GAGGAACTTG GCTACCGGTG
CTGGCAGCAT TCGCGATCCA GGCCTCCCTC GCGATCGGCC GCATGACCGG CGGCTGGGTC
GTCACTCGGT GGTCACCACT CGTGGTCGGA ACATCTGCCC TCGTCTTACT GCTGGGAGCC
ACCGGGATCG CACTACTCGA CCCGCTCCCG GTACTGACGC TTGCCGCGAC CATCGGGGTG
GGTCTCGCAT CGGGCGCGTG CCAGACCGTA GCGCTCACCT GGCTCATGCA ACGGACTGAC
ACCACAACCG GGATCAACCG GGCCAGCGCC GCATGGAACA TCTGCTTCGA CATCGGTCTG
GGACTCGGAG CCCTCGCCGT CGGCGCGACG CTCAACCAGT AG
 
Protein sequence
MMIAPPLGSA RRIAFTAGGA FAAFYIFYTT APIAFAGASL GAGVRVGIVM AVVVAVQPFV 
GLLGRWMATR RLQVTSAAIS MGLGSAIMPF AGHWPGMLLL AVGFGVFVVA STAWIKETAP
SGLLGRALGL YGFGSAIGGA LGAPLGLILI EQAGTPGTAV VGSLVALASI LPVLRLRTAV
SSDVSPGEST ASETAPRASR LWSNSRLIGL GAHLLAVTIY AAALSGLASD QNGRGTWLPV
LAAFAIQASL AIGRMTGGWV VTRWSPLVVG TSALVLLLGA TGIALLDPLP VLTLAATIGV
GLASGACQTV ALTWLMQRTD TTTGINRASA AWNICFDIGL GLGALAVGAT LNQ