Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ksed_00760 |
Symbol | |
ID | 8371589 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Kytococcus sedentarius DSM 20547 |
Kingdom | Bacteria |
Replicon accession | NC_013169 |
Strand | - |
Start bp | 81135 |
End bp | 82472 |
Gene Length | 1338 bp |
Protein Length | 445 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644990390 |
Product | diaminopimelate decarboxylase |
Protein accession | YP_003147936 |
Protein GI | 256823976 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0019] Diaminopimelate decarboxylase |
TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGAGA CCACCCCCAC CAGCCCCGAT GCGGGAAGCC TCGCCGCCCG CATCCACCCG GCCAAGCCGC TGCCCACCTC CGCCGAGCGC ATGGTGGAGC TCGCCGCCGA GCTGCCCACG CCCTTCCACC TCTACGACGA GGCTGCCATC CGCGCCCACG CCCGGGAGTT CAACGCCGCC TTCGCCTGGG CGCCGGGCTT CCTCAACCAC TTCGCCGTGA AGGCCACGCC CACCCCGGCC ATCGTCCGCG TGCTGTCCGA GGAGGGATTC GGCGCCGACT GCTCCTCCCT GCCGGAGCTC GAGCTGTGCG ACCGCTTGGG CATCCGCGGC GAGCGCATCA TGTTCACCTC CAACGACACC CCGGCGGAGG AGTTCGCCCG CGCCGTGGAG CTGGGCGCCG TGGCGAACCT CGACGACATC ACCCACCTCG ACACCCTCGA GGCCGCCGCC GGACGCCTGC CGGAATTGCT GAGCTTCCGC TACAACCCGG GCGCGGAGCG CACCGGCAAC GCCATCATCG GCGACCCGGT GCAGGCCAAG TACGGGGTCA CCTCCGAGCA GCTCCTGGAT GCCTACCGCG AGGCGCGTGA CCGGGGCGTC CAGCGTTTCG CCCTGCACAC GATGGTGGCC AGCAACGAGC TCGACGGCGC CTACATCGTC GAGACCGCCC GCATGGTCTT CGAGCTGGCG GTGCGCCTGA AGGACGAGCT CGGCATCACG CTGGAGTTCG TGAACCTCGG CGGCGGCATC GGCATCCCCT ACGGCGTCGA CGACGCACCG ATGAACCTGC AGGCCGTGAG CGACGGCATC CGTGCACTGC ACGAGCAGGT GCTCACCCCA TCGGGCCTGG AGGGACTGGG CCTGCGCTTC GAGTGCGGCC GGGTGATGAC CGGCCCGTAC GGCTACCTCG TCTCGCGCGT GCGGCAGGTG ACCCAGAAGT ACAAGACCTA CGTGGGTCTG GATGCCTCCA TGCACAACCT CATGCGCCCG GCCATGTACG GCTCGTACCA CCACATCACG GTCCTACCCG GGCCCGATGC AGCCAGCCTG CCCGATGCGG GCGACCTCGC CCCGGGCGCC ACCAGCACCT ACGACGTGAC CGGCTCCCTG TGCGAGAACA ACGACAAGTT CGCCATCGAC CGCGAACTGC CCGTGGTGCA CCCCGGTGAC GTGGTGGTGC TGCACGACGC CGGCGCCCAC GGCCACTCGA TGGGCTTCAA CTACAACGGC AAGCTCCGCT CGGCGGAGTA CCTACTCGAC CAGAACGGGC AGGCCCACCA GATCCGCCGC GCCGAGACGA TGGACGACCT GTTCGCCACG GTGGACTGGC ACGCCTGA
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Protein sequence | MTETTPTSPD AGSLAARIHP AKPLPTSAER MVELAAELPT PFHLYDEAAI RAHAREFNAA FAWAPGFLNH FAVKATPTPA IVRVLSEEGF GADCSSLPEL ELCDRLGIRG ERIMFTSNDT PAEEFARAVE LGAVANLDDI THLDTLEAAA GRLPELLSFR YNPGAERTGN AIIGDPVQAK YGVTSEQLLD AYREARDRGV QRFALHTMVA SNELDGAYIV ETARMVFELA VRLKDELGIT LEFVNLGGGI GIPYGVDDAP MNLQAVSDGI RALHEQVLTP SGLEGLGLRF ECGRVMTGPY GYLVSRVRQV TQKYKTYVGL DASMHNLMRP AMYGSYHHIT VLPGPDAASL PDAGDLAPGA TSTYDVTGSL CENNDKFAID RELPVVHPGD VVVLHDAGAH GHSMGFNYNG KLRSAEYLLD QNGQAHQIRR AETMDDLFAT VDWHA
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