Gene Ksed_00520 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_00520 
Symbol 
ID8371565 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp56135 
End bp57226 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content79% 
IMG OID644990368 
Productflavin-dependent dehydrogenase 
Protein accessionYP_003147914 
Protein GI256823954 
COG category[C] Energy production and conversion 
COG ID[COG0644] Dehydrogenases (flavoproteins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value0.845908 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.877711 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCCCCG CCGGCGCCGC GGGGGCCGCG GGGGCCGACC TGCTCGTGGT CGGCGGCGGT 
CCGGCCGGGC TCGCGACGGC GCTGGTCGCC CACCGGGTGG GGATGTCGGT GCACGTGCTC
GACCGGCGGC CGGGGGTGGT CGACAAGGCG TGCGGGGAGG GACTCATGCC CGGCGGGCTG
GAGCGGTTGC AGGCGCTCGG GGTGGACCCG CCCGGTCACG TGCTCACCGG CATCGACTAC
GTCACCCCCG CGGGCCGGCG GGCGCAGGCC TCGTTCGCGA GCCCCGGCCG CGGGGTGCGG
CGCACCGTCC TGCACGCCGC GATGCGGGCA GCGGCCCAGG ACGCGGGGCT CACCATCGCC
CACCGGCGCC TGGACGTCAC CCGCGAGCTC GACGTCCGGG CCGACCACGT GCTCCTCGAC
GGCGCGCGGT ACCGGTGGGT GGTGGGGGCC GACGGCCTGC ACTCCGGGGT CCGGGAGCTC
GTGGCCGCAC CGGCGCGACG GCCGGCGGGG GCGGTGCCCG CCCGTGTGCT GCCGCGCCGG
TACGGGCTGC GGGCCCACCT GCGCACGGCG CCGTGGACCA GCCAGGTGCA GGTGCGCTTC
GGGGACGGCG TCGAGGCCTA CCTGACCCCG GTGGCCGACG ACCTACTGGG GGTGGCGCTG
CTCTCCGCGC GGCGGGCCAC GTTCGCCGAC CACCTGTCCC GGCTGGGGGA GTTCGGACGC
CACCTCGCCG CCCACCCGGC CTCCGACTGG GGCCCGGTCG CCGGTGCGGG GCCGCTGTGG
CAGGCCGTCC CCCGGCGCGT GGCCGGGCCC GTGCTGCTGG TGGGGGACGC CGCGGGGTAC
GTGGACGCCC TCACCGGGGA GGGCGTCTCG TTGGCGCTGG CGCAGGCCCC GGCGCTGGTG
GACTGCCTCG TGGCCGGGGA CGCCCCGGCC TGGGAGCGGC GGTGGGCGCG GATGACGGCG
GCCCACCGCA TCGCGACCGC AACTTTGGTG GGAGCGGTCT CCCGGAGACC CACCCGGTCG
GCGCTGTTGG GGGCGAGCAC CACCTGGCCG GGGCTGTTCC AGCGCGTGGT GCGCTCGCTG
GCCGACGCCT GA
 
Protein sequence
MSPAGAAGAA GADLLVVGGG PAGLATALVA HRVGMSVHVL DRRPGVVDKA CGEGLMPGGL 
ERLQALGVDP PGHVLTGIDY VTPAGRRAQA SFASPGRGVR RTVLHAAMRA AAQDAGLTIA
HRRLDVTREL DVRADHVLLD GARYRWVVGA DGLHSGVREL VAAPARRPAG AVPARVLPRR
YGLRAHLRTA PWTSQVQVRF GDGVEAYLTP VADDLLGVAL LSARRATFAD HLSRLGEFGR
HLAAHPASDW GPVAGAGPLW QAVPRRVAGP VLLVGDAAGY VDALTGEGVS LALAQAPALV
DCLVAGDAPA WERRWARMTA AHRIATATLV GAVSRRPTRS ALLGASTTWP GLFQRVVRSL
ADA