Gene Ksed_00500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_00500 
Symbol 
ID8371563 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp54493 
End bp55614 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content76% 
IMG OID644990366 
Productpredicted naringenin-chalcone synthase 
Protein accessionYP_003147912 
Protein GI256823952 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3424] Predicted naringenin-chalcone synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value0.281948 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.904387 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGCCC CCTCGCGACT CCTCGCTGTC CACGTCGTCC CGGGGGGCCA CAGCGCTCCC 
CAGTCCGAGG TGACGGATGC CGTCGCGGGG CTCCTGGGCG GTAGTGCCGG CGAGGAGCGG
GTCCTGCGCC GCATCCACGC CAACGCCGGG GTGGACACGC GCTCGCTGGT GCTGCCGCTC
GAGGCCTATG GCGCGTTGGA CGGGTTCGGG ACCGCGAACG ACGCCTGGCT GGAGCACGCG
CCCCGGCTGG CGGTCGAGGC CGTCAACGGT GCCCTGGCGC AGGCGGGGGT CGACGCCGCG
GAGGTGGACG TGGTGGTCTC CACGACCGTC ACCGGCATCG CGGTGCCCTC GCTGGAGGCG
CGGATCGCCG TCGAGGTGGG TTTCCGCGAG GACGTCGTGC GGGTGCCGCT CTTCGGCCTC
GGGTGCGTGG CCGGCGCGGC CGGTATCGCC CGCGTGCACG ACCTGCTGGC CGGGCGCCCC
GACGGGGTGG CGGTGCTGCT GGCCGTGGAA CTGTGCTCGC TCACGGTGCA GCAGGGCGAC
GCCTCGCGCG CGAACATGGT TGCCTCCGGG CTGTTCGGTG ACGGGGCGGC CGCCGTGGTG
CTGGCCGGGC CCGAGCGGCG TGCGGCGGCG CCGGTGCCTG CGCCGTCGTC CCCGGCCCTG
TCGTCCCGCG CCCCCCACCT CACCGTGGTC GCCTCGCGTA GCCGGCTCTA CCCGGACACC
CACCGCGCGA TGGGGTGGGA CGTCGGCGAC GGTGGCCTGG GCATCGTGCT GGGCGCCGAG
GTGCCCGACC TGGTGACGCA GAACGTCGGG GCCGACGTCC GGGCCTTCCT CGCCGACCAC
GGCCTGGCCC CGCAGGACAT CGCCTTCCAC GTGGCCCACC CGGGCGGCCC CAAGGTGCTG
GAGGCGATGC AGGGGGCCCT GGGGGTGCCG CGCGAGGCGC TGGGCCTGAC CTGGGACTCG
TTGGCCGAGG TGGGCAACCT CTCCAGCGTC TCGGTGCTGC ACGTGCTGGG CAAGACCCTC
GCGGAGCGCC CACCGGACCC CGGCCAGTAC GGCCTGCTGC TGGCGATGGG GCCGGGGTTC
TGCGCCGAGC TGGTGCTGCT GCGGTGCGAG GAGGCGGCAT GA
 
Protein sequence
MPAPSRLLAV HVVPGGHSAP QSEVTDAVAG LLGGSAGEER VLRRIHANAG VDTRSLVLPL 
EAYGALDGFG TANDAWLEHA PRLAVEAVNG ALAQAGVDAA EVDVVVSTTV TGIAVPSLEA
RIAVEVGFRE DVVRVPLFGL GCVAGAAGIA RVHDLLAGRP DGVAVLLAVE LCSLTVQQGD
ASRANMVASG LFGDGAAAVV LAGPERRAAA PVPAPSSPAL SSRAPHLTVV ASRSRLYPDT
HRAMGWDVGD GGLGIVLGAE VPDLVTQNVG ADVRAFLADH GLAPQDIAFH VAHPGGPKVL
EAMQGALGVP REALGLTWDS LAEVGNLSSV SVLHVLGKTL AERPPDPGQY GLLLAMGPGF
CAELVLLRCE EAA