| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ksed_00340 |
|---|
| Symbol | |
|---|
| ID | 8371547 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Kytococcus sedentarius DSM 20547 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013169 |
|---|
| Strand | + |
|---|
| Start bp | 37247 |
|---|
| End bp | 38458 |
|---|
| Gene Length | 1212 bp |
|---|
| Protein Length | 403 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 644990350 |
|---|
| Product | theronine dehydrogenase-like Zn-dependent dehydrogenase |
|---|
| Protein accession | YP_003147896 |
|---|
| Protein GI | 256823936 |
|---|
| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 71 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.349198 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCGCAC TCACCTGGCA GGGCAACTCC GACGTCCGCG TCGAGGACGT CCCGGACCCC
ACCATCCAGC AGCCCACCGA CGCGATCGTC CGCGTTACCT CGACCGCGAT CTGCGGCTCT
GACCTGCACC TCTACTCCGT CCTGGGGGCG TTCCTCCACC CTGGCGACGT CCTGGGCCAC
GAGTTCATGG GCATCGTGGA GGAGGTCGGG CCCGAGGCCG CCGGCCACCT CTCCGTCGGC
GACCGCGTCG TGGTGCCCTT CAACATCTCC TGCGGCCACT GCTGGATGTG CTCCCGCGGT
CTGTTCGCCC AGTGCGAGAC CACGCAGAAC ACGAAGCAGG GCAAGGGTGC CTCGCTGTTC
GGGTACACCG ACCTCTACGG CGCCGTGCCC GGCGGGCAGG CCGAGTACGT CCGTGTGCCG
CAGGCCCAGT TCGGCCCCGT CAAGGTGCCC CACGAGGGCG CTGACGAGCG CTACCTCTAC
CTCTCGGACA TCCTGCCCAC CGCCTGGCAG GGCGTGAAGT ACGCGAACGT CCCCGATGGT
GGGACGCTGG CCGTGATGGG CTTGGGACCG GTGGGTCAGC TCGCGGTTCG CTCCGCGCTG
AAGCTCGGGG AGGCCTCCCG CGTGATCGGG GTGGACCTGG TGCCCGAGCG CCTGGAGACC
GCGAAGGCCT GGGGCGCCGA GGTGCTGGAC CTGCGCGACG TGGACGGCGG CGGGCGCGAC
CCGCAGAAGG TGGGCGAGGC GATCCGGGAG ATGACCGGTG GCCGTGGCGC CGACTCCGTC
CTCGAGGCCG TGGGCATGGA GGCGCACGGG AACCCGGTGG CCCACAAGGC GATCTCGGCC
GTCGCCCACC TCCCGGGCCC GCTCGGTCGG CCCGCCATCG AGAAGGCCGG CATCGACCGC
CTCGCGGCCC TGCACTCCTC CATCGAGGCC GTCCGCCGTG GCGGCACCGT CTCGGTTTCT
GGCGTGTACG GCGGCATGGT GGACCCGATG CCGATGATGA CGATGTTCGA CAAGGGCATC
GCCATGCGCA TGGGTCAGTG CCACGTGAAG CAGTGGACCC AGGAGCTGTT CGACGTGGCG
AACCGCAGCG AGGACCTGCT GGGTCTGGAG CAGCTCGCCA CCCACCGGGT CTCCCTGGAG
GAGGCACCGG CGATGTACGA GGTCTTCCAG AAGAAGCAGG ACAACTGCCT CAAGGTGGTG
CTGAAGCCCT GA
|
|---|
| Protein sequence | MRALTWQGNS DVRVEDVPDP TIQQPTDAIV RVTSTAICGS DLHLYSVLGA FLHPGDVLGH
EFMGIVEEVG PEAAGHLSVG DRVVVPFNIS CGHCWMCSRG LFAQCETTQN TKQGKGASLF
GYTDLYGAVP GGQAEYVRVP QAQFGPVKVP HEGADERYLY LSDILPTAWQ GVKYANVPDG
GTLAVMGLGP VGQLAVRSAL KLGEASRVIG VDLVPERLET AKAWGAEVLD LRDVDGGGRD
PQKVGEAIRE MTGGRGADSV LEAVGMEAHG NPVAHKAISA VAHLPGPLGR PAIEKAGIDR
LAALHSSIEA VRRGGTVSVS GVYGGMVDPM PMMTMFDKGI AMRMGQCHVK QWTQELFDVA
NRSEDLLGLE QLATHRVSLE EAPAMYEVFQ KKQDNCLKVV LKP
|
|---|
| |