Gene Ksed_00280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_00280 
Symbol 
ID8371541 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp30565 
End bp31593 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content71% 
IMG OID644990344 
ProductPirin-related protein 
Protein accessionYP_003147890 
Protein GI256823930 
COG category[R] General function prediction only 
COG ID[COG1741] Pirin-related protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones55 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.239735 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGCCG TGACCGCTGA GAACATCCTG GAGCTGGCCC GGGTGCAGCC GCACCCCGAG 
AGCCGGCCCC GCGCCGTGAA GTCCGTGAGC ACCGCCCCCC AAGGCCACGA GGGCGAGGGC
TTCCCCGTCC GTCGCGCCTT CGCCGGGGTG GACCTGCGCG ACCTCGACCC CTTCATCCAC
ATGGACCAGA TGGGTGAGGT GGAGTACGCA CCGCTGGAGC CCCGCGGCAC CGACTGGCAC
CCGCACCGTG GCTTCGAGAC CGTCACCTAC ATCATCGATG GCTCCTTCCT GCACGAGGAC
ACCCACGGCG GCGGTGGCGC CATCACCGAC GGCGACACCC AGTGGATGAC CGCCGGCTCG
GGGCTGCTCC ACATCGAGGC CCCGCCGGAG AAGCTCGTGA TGGACGGCGG GCTCTTCCAC
GGCCTGCAGC TCTGGGTGAA CTTGCCGGGG CACCTAAAGA TGACCGACCC GCGCTACCAG
GACATCCAGT CCGGCGACGT CCAGCTGCTC TCCAGCGAGG ACGGCGGCGC ACTGGTCCGC
GTCATCGCCG GTGAGGTGGA CGGGCACCAG GGCCCAGGCA TCACCCACAC GCCCATCAGC
ATCGTCCACG CCACCGTGTC CCCGGGTGCG CAGCTGCGCC TGCCCTGGAA CCCGGGGTAC
AACGCCCTGG TCTACGTGCT CTCCGGCGAG GGGACGATCG GCGCCGAGGG CCGTCCGCTG
CGCACCGGGC AGCTCGCCGT GCTGCGCGAC GGGGACCACA TCGAGGTCCG CGCCGACCAG
CAGCAGGACG CCCGCCACGC CCAGGGGATA GACCTCTACA TCCTCGGCGG GCAGGCGATC
AACGAGCCGG TGATGGCCTA CGGGCCGTTC GTGATGAACA CCCGCGCCCA GCTGGTCACC
GCCTTCGAGG ACTTCCAGGC CGGGCGCCTG GGAATCATCC CCAACAGCCC CCGGGTGAAG
GCCGCCTCGC AGATCGTCAA GGACGCGATC GACCGCGGCG AGGCCGCCCC GGGTCACCAC
CTGCTGTGA
 
Protein sequence
MPAVTAENIL ELARVQPHPE SRPRAVKSVS TAPQGHEGEG FPVRRAFAGV DLRDLDPFIH 
MDQMGEVEYA PLEPRGTDWH PHRGFETVTY IIDGSFLHED THGGGGAITD GDTQWMTAGS
GLLHIEAPPE KLVMDGGLFH GLQLWVNLPG HLKMTDPRYQ DIQSGDVQLL SSEDGGALVR
VIAGEVDGHQ GPGITHTPIS IVHATVSPGA QLRLPWNPGY NALVYVLSGE GTIGAEGRPL
RTGQLAVLRD GDHIEVRADQ QQDARHAQGI DLYILGGQAI NEPVMAYGPF VMNTRAQLVT
AFEDFQAGRL GIIPNSPRVK AASQIVKDAI DRGEAAPGHH LL