Gene Ksed_00180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_00180 
Symbol 
ID8371531 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp16616 
End bp19471 
Gene Length2856 bp 
Protein Length951 aa 
Translation table11 
GC content75% 
IMG OID644990334 
Productprotein kinase family protein with PASTA domain 
Protein accessionYP_003147881 
Protein GI256823921 
COG category[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms
[K] Transcription 
COG ID[COG0515] Serine/threonine protein kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.000304613 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGCGC GGAATCTGTC GGACCGGTAC GAGGTCGAGG AGCCCCTGGG CCACGGGGGC 
ATGGCCGACG TCGTGGCTGC CACCGACACG CGGCTGGGAC GGCGCGTGGC CATCAAGGTG
CTGCGGGAGG ACCTGGCCCG TGACCCTGCC TTCGTGCGCC GCTTCGAGTC CGAGGCCCTG
GCCGCCGCCC GGCTGAACCA CCCCGGCATC GTGTCGGTCT TCGATGTCGG GGAGGAGCAG
CCCGACGCCC GCGGCGGCCT GCCGCGCCCC TTCATCGTGA TGGAGAAGGT CACCGGCAGC
ACCCTGCGCA CCGTCCTGGA CACCGAGGGG AAGCTGCCCC CCACGCGGGC GGTGACGATC
GCTGCCGACG TCCTGAACGC CCTGGCGTAC AGCCACGAGC AGGGCGTCGT GCACAACGAC
ATCAAGCCGG GCAACATCAT GATCTCCGCC GACGGCTCGG TGCGGATCAT GGACTTCGGC
ATCGCCCAGG CCCTGAACGA CATCAGCATC ACGGTCAGCC AGCCGGACCA CGTGCTGGGG
ACGGCCAAGT ACATGGCCCC CGAGCTGGCC ACCGGCGAGC GCGCCGAGCC GCCCTCGGAC
GTCTACGCCT TGGGGTGCGT GCTGTTCGAG ATGCTCGCCG GACGCCCGCC GTTCCAGGGG
GACAGCGCCG CCCTGGTCAA CCAGCACCTG CACGTGGCCC CGCCCCGGGT CTCGGCCTCG
GCGCCGTCGG TGCCGCCCGC CCTGGAGGAG CTGATCGACC GGGCGCTGGC CAAGCACCCT
GCTGACCGCC CCGGGTCCGC CCGGGAGCTG GAGATCTCGC TGCGCGGTCT GCTGAACGAC
CTGAAGGGGC CGCGTCCCAC GACCACGGTC ACCGGGTCCA CCGCCCCCGC GGGGGCCTCC
GCGGCCTGGG GCGCCGGCGC TGCGGCCCCT GCTGCGGAGG AGAAGGCCTT CGGCGGCTTC
CGTCCGCTGG AGGTGGACGA TGCGGATTCG GCGCCGCGCG AGGAGCAGGC CCCGGCCTTC
CGCCCCCTGG AGGACCCCCC GGGCCACCCA TACCGTGGGT CCGAACAGCA GTCGCAGGCC
CCTGCCGTCC CCGACGCGGC GCCGGACGGT CAGGCACCCG GTGCTGACGC ACCGGACGGC
GACGCGGGGC AGGTCCGACG GATCGACCAC CGGCAGGACA CCCCGGCCGA TGCGGCCGAG
ACCACCCGGG CGCACGAAGC CCCCTCCGCG TCACGCAGCG AGGGTGCCGC AGCGCCCGAC
GACGACCCCT ACGCACCGTG GCAGCCCGGC AACGACATCC CGGGTTTCGC CGGCGACGAA
CCCGCCCCGA CGGCTCCCCC CATCGGGTCC ACGACGGACG TCTCGGGATC CACCACCGGG
TCGCAGCCGG CCGACAGCGA CGCGATCCGC ATGGCCGACA CGTCACGGAT GCACGAGGGC
GGCCGGGGCG CCGGCGACGA CCGCGACGCC ACCGGGCCGC AGCCCCTCGC GTCCGACGAC
GCCCAGGACC CCCATGATGC GAGGACCTCC CGGGTGGCCG CGGCCGGCGC CGGGGCGACG
GCGGCTGCCG GGGCGGCCGC CACCGGGGCC TCGGAGGGAC CGGATGGGCC GGAGGGCGAC
GACCCCGACT CCCCGCCGAC CCGTGCGGTG AACACCGGCT CGGGCACGAC CGTCTCCGGC
ACCACCCGGC TGGGTGAGAC CGGGGGCAAC CCCACGACCA GCGACGCCAC GGGGCCGGTC
ACCGGACGGT TCAGCCGCCG GGCCCGTCGG GAGGGTGTGC CGTGGTGGGC GTGGCCCGTC
GCGGGCCTGG CCCTCGTCGG CGTCGCCGCG GGGGTGGCCG CCGGCATCGA CAACTGGAGC
AACGAGCGCG GGTCGGTCTC CGTCCCGGAC GTCCGCGGCA AGAGCCAGCA GGAGGCCGAG
GAGATCCTGA AGGATGCCGA TCTGGAGGTC CGCATCGAGG GACGGGTGGA CGAGGCCCCG
CTGGGCACCG TCCTGGAGCA GACCCCCGGC CCGGACACCG CCGTGGAGCG CGGATCGGCC
GTGACGCTGG TGGTCGCCTC GACCGAGAAC AGCCCTGCCC CCTCGGGCTC GTCGGGCGAC
CCCTCCTCCA GTGAGTCCTC GAGCAGCGAC CAGAGCCCCA GCGACTCCTC CGGTGGGGAG
TCCTCCCGCG AGGAGTCCTC CGGCGGGAAC GAGTCGTCGG ACGCCGGACC CTCCACCTCC
CAGACGCCGG ACCCGACGAC CAGCGGCCCG GGCGGCGTCC CCGTGCCCCC GCCGAGCACG
CCGGAGCTCC CCCCGACCGA TGGGGGGCAG CCCACCACCG AGCCGGGCCC GGACCCCACG
ACCACGACCG AGCCCGACCC GACCACGACC GAGCCCGACC CCACCACGAC CGAGCCCGAC
CCCACCACCT CCGAACCCGA CCCCACCACC TCCGAGCCGG ACCCGACCAC GTCGGAACCC
GACCCCACGA CCACGGAGCC CGACCCGACC ACCTCGGAGC CCGACCCGAC CACGTCGGAA
CCGGACCCGA CGACCTCCGA GCCGGACCCC ACCACGTCGG AACCCGACCC CACGACCTCC
GAGCCGGACC CGACCACGTC GGAACCCGAC CCCACCACCA CGGAGCCCGA CCCCACCACC
TCCGAACCCG ACCCCACCAC CACGGAGCCC GACCCCACCA CCTCCGAACC GGACCCCAGC
ACCTCGGAAC CGACCACGTC CGAACCGGAC CCGACGGAGC GGTCGGCCGA CCCCAGCCCG
TCCACCGAAC CCACCCCCAC GGGCGACCCC AGCTCGCCGG GCCCCACCTC CCCGGAGCCC
ACCTCGCCCG AGCCGACCTC ACCCTCGCGG TCCTGA
 
Protein sequence
MDARNLSDRY EVEEPLGHGG MADVVAATDT RLGRRVAIKV LREDLARDPA FVRRFESEAL 
AAARLNHPGI VSVFDVGEEQ PDARGGLPRP FIVMEKVTGS TLRTVLDTEG KLPPTRAVTI
AADVLNALAY SHEQGVVHND IKPGNIMISA DGSVRIMDFG IAQALNDISI TVSQPDHVLG
TAKYMAPELA TGERAEPPSD VYALGCVLFE MLAGRPPFQG DSAALVNQHL HVAPPRVSAS
APSVPPALEE LIDRALAKHP ADRPGSAREL EISLRGLLND LKGPRPTTTV TGSTAPAGAS
AAWGAGAAAP AAEEKAFGGF RPLEVDDADS APREEQAPAF RPLEDPPGHP YRGSEQQSQA
PAVPDAAPDG QAPGADAPDG DAGQVRRIDH RQDTPADAAE TTRAHEAPSA SRSEGAAAPD
DDPYAPWQPG NDIPGFAGDE PAPTAPPIGS TTDVSGSTTG SQPADSDAIR MADTSRMHEG
GRGAGDDRDA TGPQPLASDD AQDPHDARTS RVAAAGAGAT AAAGAAATGA SEGPDGPEGD
DPDSPPTRAV NTGSGTTVSG TTRLGETGGN PTTSDATGPV TGRFSRRARR EGVPWWAWPV
AGLALVGVAA GVAAGIDNWS NERGSVSVPD VRGKSQQEAE EILKDADLEV RIEGRVDEAP
LGTVLEQTPG PDTAVERGSA VTLVVASTEN SPAPSGSSGD PSSSESSSSD QSPSDSSGGE
SSREESSGGN ESSDAGPSTS QTPDPTTSGP GGVPVPPPST PELPPTDGGQ PTTEPGPDPT
TTTEPDPTTT EPDPTTTEPD PTTSEPDPTT SEPDPTTSEP DPTTTEPDPT TSEPDPTTSE
PDPTTSEPDP TTSEPDPTTS EPDPTTSEPD PTTTEPDPTT SEPDPTTTEP DPTTSEPDPS
TSEPTTSEPD PTERSADPSP STEPTPTGDP SSPGPTSPEP TSPEPTSPSR S