Gene Shel_28270 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_28270 
Symbol 
ID8396715 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand+ 
Start bp3133523 
End bp3134140 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content56% 
IMG OID644987566 
Producttranscriptional regulator 
Protein accessionYP_003145166 
Protein GI257065494 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.188874 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCTACG ATTTCGACAA GACGCACGAA AGCATACTGG AAAGCGCTGC GCGGCATTTC 
TTGGACGCAG GGTTTGCCGG CGCCTCCATC CGGCAGATTT GCAGAGACGC CGGCGTGACG 
AACGGGGCGT TCTATGCTCA TTTCGAAAGC AAGGATGACC TGTTCGCCAG CCTTGTAGAG 
CCAACACTGG AAGGCTTGAA CAACCTGTAC GGCGCCGAGG CATCCCGTTT TCGGGAAATC 
CACAGCACCG ACGACGTGCT GGAGGCCCTT GACCTCGCAT TTTCCGCTGA CGAAGCCATC 
ATTCGCTACA TCTACGACCA CGCCGAAGCG TTCAATCTGC TGCTAAAAGC GAACGGCGGA 
ACCTCGTATG AGCAGCTCCC AGACAGCATC GCCGAAACGG AAAAAGAAAA TACGCTCGCC 
TTCTTCGAAC TGTGCAAGCC GTTCGTCAAC AAACCGGAGA ACATCTCAGG CAGCATCGCC 
GCACAGGCCA GCACATTCAT CGTCAAGACC GTCTTCGACT GTCTGCTTTC CGGCAAATCC 
GAGAGCGAGG CCATTCGCGA GGCACAGCTG GCGTCGGAAT TCTGCCTTGC TGGGTTGAAA 
CAGATTTGGG GCATTTAA
 
Protein sequence
MGYDFDKTHE SILESAARHF LDAGFAGASI RQICRDAGVT NGAFYAHFES KDDLFASLVE 
PTLEGLNNLY GAEASRFREI HSTDDVLEAL DLAFSADEAI IRYIYDHAEA FNLLLKANGG 
TSYEQLPDSI AETEKENTLA FFELCKPFVN KPENISGSIA AQASTFIVKT VFDCLLSGKS 
ESEAIREAQL ASEFCLAGLK QIWGI