Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_28200 |
Symbol | |
ID | 8396708 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | - |
Start bp | 3125174 |
End bp | 3126313 |
Gene Length | 1140 bp |
Protein Length | 379 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 644987559 |
Product | aspartate/tyrosine/aromatic aminotransferase |
Protein accession | YP_003145159 |
Protein GI | 257065487 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000110278 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.621857 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGCTGC CTCTGAATTC TGCACTTGAT CGTCTGCAAC TGTCGGGAAT CCGCAAGTTC GCAGCTTTGG CGAAAGAAGT TCCCGGATGC ATTTCGCTTA CTATGGGCGA GCCGGGCGAA AACACCCCCG ACGCCATAAA AGACCAGGTC GCACTGGACT TGGCGGCAAA CATGACGCAC TATCCGCCCA ACAACGGGCA CGCGTTTTTG AAAGAAGCCA TCTCGGAGTT CATGGCTCGC CAGGGCCTGG CGTATTCGCC TGACGAGATC ATCGTGACCG CCGGCGCCAC CGAGGCGCTG TACGCAGCGG CAACGACGGT GCTGAGCCCC GGCGACGAGG TGGTCATCCC CGGCCCCGGC TTCATCCTGT ACGAATCCAT GACCATCGTT AACCACGGCA CGCCGGTGGT ATTCGACACC ACGCCGACGA ACTACCAGAT CACGCCCGAG GCGCTGGAGG CTGCGGTGAC CGACCGCACC AAAGCCATTG TGCTCACGTC GCCCAACAAC CCGACCGGCG TCATCCTCAA CAAGGATAGC CTGGCGGCTG TGGCGAAAGT GGCCCGCGAG CGCGGCATCT ACGTGATTTG CGACGATGTG TACAACCAGC TGGTGTACGC CGACGGTTAC AAGAGCTTTG CAGAAAGCTA TCCTGACCTG CGGGAACAGA CCATCCGCGT GGATAGCTTC AGCAAGCCGT ACGCTATGAC CGGCTGGCGC ATGGGCTGGA TTGCCGCCGA TGCAAGCTTT ATCGCTCAGG CGTCGAAGAT CCACCAGTAC ATGGTTTCGT GCATTCCGTC CTTCCTGCAG CATGCCGGCG TCGAGGCGCT GGCCACGGAC ATCGCACCCA TGCGCAAGAT GTATCGGCAG CGTCGCGACC TGGTGGTTTC GCGCTTGCGC GAAATGGGTC TTGACCTGGT GGAACCCGAA GGCGCTTTCT ATGCGTTCCC CTCGATCGAG CAGTTCGGCA TGACCTCCGA GGAGTTCTGC CGCCGCTTGA TTTTCGAAGG CGGCGTGGCC CTCACGCCGG GCGTGTTCTT CAACGGCGAA GGGCACGTAC GCCCGTCGTT CGCCAGCAGC TACGACGTGC TTGAAGAGGG GCTCTCCCGC ATGGCAACCT TTGTGGACGG CTTGCGCTAA
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Protein sequence | MSLPLNSALD RLQLSGIRKF AALAKEVPGC ISLTMGEPGE NTPDAIKDQV ALDLAANMTH YPPNNGHAFL KEAISEFMAR QGLAYSPDEI IVTAGATEAL YAAATTVLSP GDEVVIPGPG FILYESMTIV NHGTPVVFDT TPTNYQITPE ALEAAVTDRT KAIVLTSPNN PTGVILNKDS LAAVAKVARE RGIYVICDDV YNQLVYADGY KSFAESYPDL REQTIRVDSF SKPYAMTGWR MGWIAADASF IAQASKIHQY MVSCIPSFLQ HAGVEALATD IAPMRKMYRQ RRDLVVSRLR EMGLDLVEPE GAFYAFPSIE QFGMTSEEFC RRLIFEGGVA LTPGVFFNGE GHVRPSFASS YDVLEEGLSR MATFVDGLR
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